@@ Line 9: / Line 9: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 6.14.1, 2020, 2021
+| align="center" | 2020, 2021, 6.14.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Finite Element Analysis software for modeling, visualization and best-in-class implicit and explicit dynamics FEA. Homepage: http://www.simulia.com/products/abaqus_fea.html URL: http://www.simulia.com/products/abaqus_fea.html Keyword:phys<br /><br /></div>
 |-
@@ Line 15: / Line 15: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 8.2.2, 8.10.2, 8.4.4, 8.8.4
+| align="center" | 8.2.2, 8.8.4, 8.4.4, 8.10.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ABINIT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (molecules and periodic solids) within Density Functional Theory (DFT), using pseudopotentials and a planewave or wavelet basis. Homepage: http://www.abinit.org/ URL: http://www.abinit.org/ Keyword:chem<br /><br /></div>
 |-
@@ Line 39: / Line 39: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2019.3, 2020.3, 2018.3
+| align="center" | 2018.3, 2019.3, 2020.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Vectorization Optimization and Thread Prototyping - Vectorize and thread code or performance dies - Easy workflow + data + tips = faster code faster - Prioritize, Prototype and Predict performance gain Homepage: https://software.intel.com/intel-advisor-xe URL: https://software.intel.com/intel-advisor-xe Keyword:tools<br /><br /></div>
 |-
@@ Line 81: / Line 81: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 2019R2, 17.2, 19.1, 18.2, 16.2.3, 2023R1, 2021R1, 18.1, 19.2, 2022R2, 2019R3, 2023R2, 2021R2, 2020R2, 2022R1, 2020R1
+| align="center" | 17.2, 2023R2, 2019R2, 18.2, 2021R2, 2022R2, 2022R1, 2023R1, 2021R1, 2019R3, 2020R2, 18.1, 2020R1, 19.2, 16.2.3, 19.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ANSYS simulation software enables organizations to confidently predict how their products will operate in the real world. We believe that every product is a promise of something greater. Homepage: http://www.ansys.com URL: http://www.ansys.com Keyword:phys<br /><br /></div>
 |-
@@ Line 87: / Line 87: @@
 | align="center" | -
 | align="center" |
-| align="center" | 2021R2, 2023R2
+| align="center" | 2023R2, 2021R2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ANSYS simulation software enables organizations to confidently predict how their products will operate in the real world. We believe that every product is a promise of something greater. Homepage: http://www.ansys.com URL: http://www.ansys.com<br /><br /></div>
 |-
@@ Line 93: / Line 93: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.9.15, 1.10.8
+| align="center" | 1.10.8, 1.9.15
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Apache Ant is a Java library and command-line tool whose mission is to drive processes described in build files as targets and extension points dependent upon each other. The main known usage of Ant is the build of Java applications. Homepage: https://ant.apache.org/ URL: https://ant.apache.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 105: / Line 105: @@
 | align="center" | -
 | align="center" |
-| align="center" | 1.2.4, 1.1.6, 1.1.3, 1.1.8, 1.1.5
+| align="center" | 1.1.3, 1.1.6, 1.1.8, 1.1.5, 1.2.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Apptainer/Singularity is an application containerization solution for High-Performance Computing (HPC). The goal of Apptainer is to allow for "mobility of computing": an application containerized on one Linux system should be able to run on another system, as it is, and without the need to reconcile software dependencies and Linux version differences between the source and target systems. Homepage: https://apptainer.org URL: https://apptainer.org<br /><br /></div>
 |-
@@ Line 117: / Line 117: @@
 | align="center" | math
 | align="center" |
-| align="center" | 3.5.0, 3.4.0
+| align="center" | 3.4.0, 3.5.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems. - Homepage: http://forge.scilab.org/index.php/p/arpack-ng/ Keyword:math<br /><br /></div>
 |-
@@ Line 153: / Line 153: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 0.27.0, 0.7.0, 0.25.2, 0.5.2, 0.19.2, 0.11.1
+| align="center" | 0.19.2, 0.25.2, 0.5.2, 0.7.0, 0.27.0, 0.11.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Bazel is a build tool that builds code quickly and reliably. It is used to build the majority of Google's software. Homepage: http://bazel.io/ Keyword:tools<br /><br /></div>
 |-
@@ Line 183: / Line 183: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.8.2, 2.4.0
+| align="center" | 2.4.0, 1.8.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST uses MCMC to average over tree space, so that each tree is weighted proportional to its posterior probability. Homepage: http://beast.bio.ed.ac.uk/ Keyword:bio<br /><br /></div>
 |-
@@ Line 195: / Line 195: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.26.0, 2.29.0, 2.27.1
+| align="center" | 2.27.1, 2.29.0, 2.26.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Homepage: https://github.com/arq5x/bedtools2 URL: https://github.com/arq5x/bedtools2 Keyword:bio<br /><br /></div>
 |-
@@ Line 213: / Line 213: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.7.1, 1.7.5, 1.7.7, 1.7.8
+| align="center" | 1.7.5, 1.7.7, 1.7.1, 1.7.8
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Bioperl is the product of a community effort to produce Perl code which is useful in biology. Examples include Sequence objects, Alignment objects and database searching objects. Homepage: http://www.bioperl.org/ Extensions: DBD::mysql-4.050, DBD::Pg-3.8.1, Devel::CheckLib-1.13, Devel::Cycle-1.12, IO::CaptureOutput-1.1104, PadWalker-2.3, Spiffy-0.46, Test::Base-0.89, Test::Memory::Cycle-1.06, Test::RequiresInternet-0.05, Test::Weaken-3.022000, Test::YAML-1.07, XML::DOM::XPath-0.14, XML::Filter::BufferText-1.01, XML::Parser-2.44, XML::RegExp-0.04, XML::XPathEngine-0.14, YAML-1.29 Keyword:bio<br /><br /></div>
 |-
@@ Line 267: / Line 267: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.60.0, 1.68.0, 1.72.0, 1.65.1, 1.63.0
+| align="center" | 1.68.0, 1.65.1, 1.72.0, 1.60.0, 1.63.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Boost provides free peer-reviewed portable C++ source libraries. Homepage: https://www.boost.org/ URL: https://www.boost.org/ Compatible modules: python/2.7, python/3.6, python/3.7, python/3.8 Keyword:tools<br /><br /></div>
 |-
@@ Line 273: / Line 273: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.68.0, 1.72.0, 1.60.0, 1.65.1
+| align="center" | 1.68.0, 1.60.0, 1.65.1, 1.72.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Boost provides free peer-reviewed portable C++ source libraries. Homepage: https://www.boost.org/ URL: https://www.boost.org/ Compatible modules: python/2.7, python/3.6, python/3.7, python/3.8 Keyword:tools<br /><br /></div>
 |-
@@ Line 285: / Line 285: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.3.5, 2.3.3.1, 2.3.0
+| align="center" | 2.3.0, 2.3.5, 2.3.3.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes. - Homepage: http://bowtie-bio.sourceforge.net/bowtie2/index.shtml Keyword:bio<br /><br /></div>
 |-
@@ Line 309: / Line 309: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.7.1, 1.6, 1.5, 1.8
+| align="center" | 1.8, 1.6, 1.7.1, 1.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION). Canu is a hierarchical assembly pipeline which runs in four steps: Detect overlaps in high-noise sequences using MHAP Generate corrected sequence consensus Trim corrected sequences Assemble trimmed corrected sequences Homepage: https://github.com/marbl/canu Keyword:bio<br /><br /></div>
 |-
@@ Line 369: / Line 369: @@
 | align="center" | vis
 | align="center" |
-| align="center" | 3.48, 3.42
+| align="center" | 3.42, 3.48
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CFITSIO is a library of C and Fortran subroutines for reading and writing data files in FITS (Flexible Image Transport System) data format. Homepage: https://heasarc.gsfc.nasa.gov/docs/software/fitsio// URL: https://heasarc.gsfc.nasa.gov/docs/software/fitsio// Keyword:vis<br /><br /></div>
 |-
@@ Line 375: / Line 375: @@
 | align="center" | math
 | align="center" |
-| align="center" | 5.5.2, 4.9, 4.14.3
+| align="center" | 4.9, 5.5.2, 4.14.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The goal of the CGAL Open Source Project is to provide easy access to efficient and reliable geometric algorithms in the form of a C++ library. Homepage: https://www.cgal.org/ URL: https://www.cgal.org/ Keyword:math<br /><br /></div>
 |-
@@ Line 405: / Line 405: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.9.0, 3.8.1
+| align="center" | 3.8.1, 3.9.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: C, C++, Objective-C compiler, based on LLVM. Does not include C++ standard library -- use libstdc++ from GCC. Homepage: http://clang.llvm.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 411: / Line 411: @@
 | align="center" | math
 | align="center" |
-| align="center" | 2.4.1.2, 2.4.1.0, 2.3.1.1
+| align="center" | 2.3.1.1, 2.4.1.0, 2.4.1.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The CLHEP project is intended to be a set of HEP-specific foundation and utility classes such as random generators, physics vectors, geometry and linear algebra. CLHEP is structured in a set of packages independent of any external package. Homepage: http://proj-clhep.web.cern.ch/proj-clhep/ URL: http://proj-clhep.web.cern.ch/proj-clhep/ Keyword:math<br /><br /></div>
 |-
@@ Line 417: / Line 417: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.18.4, 3.12.3, 3.23.1, 3.27.7, 3.16.3, 3.22.1, 3.21.4, 3.20.1
+| align="center" | 3.12.3, 3.20.1, 3.21.4, 3.16.3, 3.18.4, 3.22.1, 3.27.7, 3.23.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CMake, the cross-platform, open-source build system. CMake is a family of tools designed to build, test and package software. Homepage: https://www.cmake.org URL: https://www.cmake.org Keyword:tools<br /><br /></div>
 |-
@@ Line 441: / Line 441: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 6.0.0.405, 5.6, 5.5, 6.1.0.357, 5.3a, 5.4, 6.2
+| align="center" | 5.6, 6.1.0.357, 5.3a, 5.4, 6.0, 6.0.0.405, 5.5, 6.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: COMSOL Multiphysics is a general-purpose software platform, based on advanced numerical methods, for modeling and simulating physics-based problems. Homepage: https://www.comsol.com URL: https://www.comsol.com Keyword:phys<br /><br /></div>
 |-
@@ Line 471: / Line 471: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 58, 34
+| align="center" | 34, 58
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Scientific workflow engine designed for simplicity and scalability. Trivially transition between one off use cases to massive scale production environments http://cromwell.readthedocs.io/ Homepage: https://cromwell.readthedocs.io/ URL: https://cromwell.readthedocs.io/ Keyword:tools<br /><br /></div>
 |-
@@ Line 489: / Line 489: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 10.1, 8.0.44, 11.1.1, 11.0, 7.5.18, 11.2.2
+| align="center" | 8.0.44, 11.2.2, 11.0, 11.1.1, 10.1, 7.5.18
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. Homepage: https://developer.nvidia.com/cuda-toolkit URL: https://developer.nvidia.com/cuda-toolkit Keyword:tools<br /><br /></div>
 |-
@@ Line 495: / Line 495: @@
 | align="center" | math
 | align="center" |
-| align="center" | 7.0, 5.1, 8.6.0.163, 8.9.5.29, 7.6.5, 8.0.3, 8.2.0, 8.7.0.84
+| align="center" | 7.0, 8.0.3, 6.0, 7.6.5, 8.9.5.29, 8.6.0.163, 5.1, 8.7.0.84, 8.2.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The NVIDIA CUDA Deep Neural Network library (cuDNN) is a GPU-accelerated library of primitives for deep neural networks. Homepage: https://developer.nvidia.com/cudnn URL: https://developer.nvidia.com/cudnn Keyword:math<br /><br /></div>
 |-
@@ Line 549: / Line 549: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 22.0.1, 19.1.4, 7.1, 20.2, 18.3
+| align="center" | 7.1, 18.3, 22.0.1, 20.2, 19.1.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Profiler and debugger, combining Arm MAP and Arm DDT. Homepage: http://www.allinea.com URL: http://www.allinea.com<br /><br /></div>
 |-
@@ Line 555: / Line 555: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 22.0.1, 19.1.4, 7.1, 20.2, 18.3
+| align="center" | 7.1, 18.3, 22.0.1, 20.2, 19.1.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Profiler and debugger, combining Arm MAP and Arm DDT, with support for CUDA. Homepage: http://www.allinea.com URL: http://www.allinea.com<br /><br /></div>
 |-
@@ Line 573: / Line 573: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 0.9.32, 0.9.8, 0.9.22
+| align="center" | 0.9.22, 0.9.32, 0.9.8
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Accelerated BLAST compatible local sequence aligner Homepage: https://github.com/bbuchfink/diamond URL: https://github.com/bbuchfink/diamond Keyword:bio<br /><br /></div>
 |-
@@ Line 585: / Line 585: @@
 | align="center" | -
 | align="center" |
-| align="center" | 0.2.1, 0.2.2, 0.3.0
+| align="center" | 0.2.1, 0.3.0, 0.2.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Dorado is a high-performance, easy-to-use, open source basecaller for Oxford Nanopore reads. Homepage: https://github.com/nanoporetech/dorado URL: https://github.com/nanoporetech/dorado<br /><br /></div>
 |-
@@ Line 591: / Line 591: @@
 | align="center" | -
 | align="center" |
-| align="center" | 6.0.0, 3.0.0, 5.0.12, 3.1.8
+| align="center" | 5.0.12, 3.0.0, 3.1.8, 6.0.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: .NET is a free, cross-platform, open source developer platform for building many different types of applications. With .NET, you can use multiple languages, editors, and libraries to build for web, mobile, desktop, gaming, and IoT. Contains the SDK and the Runtime. Homepage: https://www.microsoft.com/net/ URL: https://www.microsoft.com/net/<br /><br /></div>
 |-
@@ Line 609: / Line 609: @@
 | align="center" | math
 | align="center" |
-| align="center" | 3.3.7, 3.2.10, 3.3.2, 3.2.2, 3.3.5
+| align="center" | 3.3.2, 3.2.2, 3.3.7, 3.3.5, 3.2.10
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Eigen is a C++ template library for linear algebra: matrices, vectors, numerical solvers, and related algorithms. Homepage: https://eigen.tuxfamily.org/index.php?title=Main_Page URL: https://eigen.tuxfamily.org/index.php?title=Main_Page Keyword:math<br /><br /></div>
 |-
@@ Line 633: / Line 633: @@
 | align="center" | -
 | align="center" |
-| align="center" | 9.3.0, 23.2.0
+| align="center" | 23.2.0, 9.3.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: EnergyPlus is a whole building energy simulation program that engineers, architects, and researchers use to model both energy consumptionfor heating, cooling, ventilation, lighting and plug and process loadsand water use in buildings. Homepage: https://energyplus.net/downloads URL: https://energyplus.net/downloads<br /><br /></div>
 |-
@@ Line 675: / Line 675: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2.2.9, 2.2.5, 2.2.10, 2.2.6
+| align="center" | 2.2.5, 2.2.10, 2.2.6, 2.2.9
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Expat is an XML parser library written in C. It is a stream-oriented parser in which an application registers handlers for things the parser might find in the XML document (like start tags) Homepage: http://expat.sourceforge.net/ URL: http://expat.sourceforge.net/ Keyword:tools<br /><br /></div>
 |-
@@ Line 693: / Line 693: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 0.12.0, 0.11.5, 0.11.9, 0.11.8
+| align="center" | 0.11.5, 0.11.8, 0.11.9, 0.12.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: FastQC is a quality control application for high throughput sequence data. It reads in sequence data in a variety of formats and can either provide an interactive application to review the results of several different QC checks, or create an HTML based report which can be integrated into a pipeline. Homepage: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ URL: https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ Keyword:bio<br /><br /></div>
 |-
@@ Line 705: / Line 705: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.7.0.9, 2.6.0.3
+| align="center" | 2.6.0.3, 2.7.0.9
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: While preserving all the simulation flexibility of simcoal2, fastsimcoal is now implemented under a faster continous-time sequential Markovian coalescent approximation, allowing it to efficiently generate genetic diversity for different types of markers along large genomic regions, for both present or ancient samples. It includes a parameter sampler allowing its integration into Bayesian or likelihood parameter estimation procedure. fastsimcoal can handle very complex evolutionary scenarios including an arbitrary migration matrix between samples, historical events allowing for population resize, population fusion and fission, admixture events, changes in migration matrix, or changes in population growth rates. The time of sampling can be specified independently for each sample, allowing for serial sampling in the same or in different populations. Homepage: http://cmpg.unibe.ch/software/fastsimcoal2/ URL: http://cmpg.unibe.ch/software/fastsimcoal2/ Keyword:bio<br /><br /></div>
 |-
@@ Line 729: / Line 729: @@
 | align="center" | math
 | align="center" |
-| align="center" | 3.3.4, 3.3.8, 3.3.6
+| align="center" | 3.3.6, 3.3.4, 3.3.8
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: FFTW is a C subroutine library for computing the discrete Fourier transform (DFT) in one or more dimensions, of arbitrary input size, and of both real and complex data. Homepage: http://www.fftw.org URL: http://www.fftw.org Keyword:math<br /><br /></div>
 |-
@@ Line 765: / Line 765: @@
 | align="center" | -
 | align="center" |
-| align="center" | 6.2.1, 6.1.1, 7.0.3, 5.3.0
+| align="center" | 6.1.1, 7.0.3, 6.2.1, 5.3.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: fmt (formerly cppformat) is an open-source formatting library. Homepage: http://fmtlib.net/ URL: http://fmtlib.net/<br /><br /></div>
 |-
@@ Line 825: / Line 825: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 20190630-R1, 20170420-R1, 20180920-R3
+| align="center" | 20180920-R3, 20190630-R1, 20170420-R1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The General Atomic and Molecular Electronic Structure System (GAMESS) is a general ab initio quantum chemistry package. This version of GAMESS is built with Intel compilers and IntelMPI. It includes experimental MU CoupledCluster theory code. Homepage: https://www.msg.chem.iastate.edu/GAMESS/GAMESS.html Keyword:chem<br /><br /></div>
 |-
@@ Line 837: / Line 837: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 4.2.2.0, 4.2.5.0, 4.1.7.0, 3.8, 4.0.0.0, 3.7, 4.1.0.0, 4.1.2.0, 4.0.8.1, 4.0.12.0, 4.2.4.0, 4.1.8.0, 4.1.8.1
+| align="center" | 4.1.7.0, 4.2.5.0, 4.1.8.0, 4.0.8.1, 4.0.12.0, 4.1.8.1, 4.1.2.0, 4.2.2.0, 3.8, 4.0.0.0, 4.2.4.0, 4.1.0.0, 3.7
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Homepage: http://www.broadinstitute.org/gatk/ URL: http://www.broadinstitute.org/gatk/ Keyword:bio<br /><br /></div>
 |-
@@ Line 855: / Line 855: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 10.3.0, 7.3.0, 8.4.0, 6.4.0, 5.4.0, 9.1.0, 8.3.0, 11.3.0, 10.2.0, 4.8.5, 9.3.0, 4.9.4
+| align="center" | 8.3.0, 5.4.0, 4.9.4, 11.3.0, 8.4.0, 4.8.5, 10.2.0, 10.3.0, 7.3.0, 9.1.0, 6.4.0, 9.3.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, as well as libraries for these languages (libstdc++, libgcj,...). Homepage: https://gcc.gnu.org/ URL: https://gcc.gnu.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 873: / Line 873: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 10.05.p01, 10.02.p03, 10.04.p02
+| align="center" | 10.02.p03, 10.05.p01, 10.04.p02
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science. Homepage: http://geant4.cern.ch/ URL: http://geant4.cern.ch/ Keyword:phys<br /><br /></div>
 |-
@@ Line 879: / Line 879: @@
 | align="center" | -
 | align="center" |
-| align="center" | 11.1.0, 10.7.3
+| align="center" | 10.7.3, 11.1.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Datasets for Geant4. Homepage: https://geant4.cern.ch/ URL: https://geant4.cern.ch/<br /><br /></div>
 |-
@@ Line 885: / Line 885: @@
 | align="center" | -
 | align="center" |
-| align="center" | 10.05.p01, 10.02.p03
+| align="center" | 10.02.p03, 10.05.p01
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science. Homepage: http://geant4.cern.ch/<br /><br /></div>
 |-
@@ Line 963: / Line 963: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.18.3, 1.14.4, 1.21.3, 1.10.3, 1.14.1
+| align="center" | 1.21.3, 1.14.4, 1.10.3, 1.18.3, 1.14.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Go is an open source programming language that makes it easy to build simple, reliable, and efficient software. Homepage: https://www.golang.org URL: https://www.golang.org Keyword:tools<br /><br /></div>
 |-
@@ Line 975: / Line 975: @@
 | align="center" | chem
 | align="center" | [[GROMACS]]
-| align="center" | 2019.2, 5.1.4, 5.0.7, 4.6.7, 2016.3, 2019.3
+| align="center" | 5.1.4, 5.0.7, 2019.3, 2016.3, 4.6.7, 2019.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: GROMACS is a versatile package to perform molecular dynamics. i.e. simulating the Newtonian equations of motion for systems with hundreds to millions of particles. - CC-Wiki: GROMACS Homepage: http://www.gromacs.org URL: http://www.gromacs.org Keyword:chem<br /><br /></div>
 |-
@@ Line 981: / Line 981: @@
 | align="center" | chem
 | align="center" | [[GROMACS]]
-| align="center" | 2018.1, 2016.3
+| align="center" | 2016.3, 2018.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: GROMACS is a versatile package to perform molecular dynamics. This version contains the PLUMED patches in order to run metadynamics. - CC-Wiki: GROMACS Homepage: http://www.gromacs.org Keyword:chem<br /><br /></div>
 |-
@@ Line 987: / Line 987: @@
 | align="center" | math
 | align="center" |
-| align="center" | 1.16, 2.3, 2.2.1, 2.6, 2.5
+| align="center" | 2.3, 1.16, 2.2.1, 2.6, 2.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The GNU Scientific Library (GSL) is a numerical library for C and C++ programmers. The library provides a wide range of mathematical routines such as random number generators, special functions and least-squares fitting. Homepage: https://www.gnu.org/software/gsl/ URL: https://www.gnu.org/software/gsl/ Keyword:math<br /><br /></div>
 |-
@@ Line 1,023: / Line 1,023: @@
 | align="center" | math
 | align="center" |
-| align="center" | 9.0.2, 9.1.0, 9.0.1, 8.1.1, 10.0.3, 10.0.1, 11.0.0, 10.0.2, 9.1.2, 9.0.3, 9.5.0, 9.5.2
+| align="center" | 9.0.1, 9.0.3, 9.1.0, 8.1.1, 9.5.0, 10.0.1, 10.0.2, 9.0.2, 11.0.0, 10.0.3, 9.5.2, 9.1.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Gurobi Optimizer is a state-of-the-art solver for mathematical programming. The solvers in the Gurobi Optimizer were designed from the ground up to exploit modern architectures and multi-core processors, using the most advanced implementations of the latest algorithms. Homepage: https://www.gurobi.com URL: https://www.gurobi.com Keyword:math<br /><br /></div>
 |-
@@ Line 1,053: / Line 1,053: @@
 | align="center" | io
 | align="center" |
-| align="center" | 1.10.3, 1.8.18, 1.8.20, 1.10.6
+| align="center" | 1.8.20, 1.8.18, 1.10.3, 1.10.6
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. Homepage: https://portal.hdfgroup.org/display/support URL: https://portal.hdfgroup.org/display/support Compatible modules: python/3.6, python/3.7, python/3.8 Extensions: cached-property-1.5.2, h5py-3.1.0, tables-3.6.1 Keyword:io<br /><br /></div>
 |-
@@ Line 1,059: / Line 1,059: @@
 | align="center" | io
 | align="center" |
-| align="center" | 1.8.18, 1.10.3, 1.10.6
+| align="center" | 1.10.6, 1.10.3, 1.8.18
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and complex data. Homepage: https://portal.hdfgroup.org/display/support URL: https://portal.hdfgroup.org/display/support Compatible modules: python/3.6, python/3.7, python/3.8 Extensions: cached-property-1.5.2, h5py-3.1.0, tables-3.6.1 Keyword:io<br /><br /></div>
 |-
@@ Line 1,101: / Line 1,101: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.5, 1.4, 1.9
+| align="center" | 1.4, 1.9, 1.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: A C library for reading/writing high-throughput sequencing data. This package includes the utilities bgzip and tabix - Homepage: http://www.htslib.org/ Keyword:bio<br /><br /></div>
 |-
@@ Line 1,119: / Line 1,119: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.18.0, 1.16.0, 1.17.0, 1.7.0
+| align="center" | 1.17.0, 1.16.0, 1.18.0, 1.7.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: IgBLAST was developed at NCBI to facilitate analysis of immunoglobulin variable domain sequences (IgBLAST has recently been extended to perform analysis for T cell receptor (TR) sequences). It uses BLAST search algorithm. Homepage: https://www.ncbi.nlm.nih.gov/igblast/intro.html URL: https://www.ncbi.nlm.nih.gov/igblast/intro.html Keyword:bio<br /><br /></div>
 |-
@@ Line 1,149: / Line 1,149: @@
 | align="center" | math
 | align="center" |
-| align="center" | 2022.1.0, 2019.2.187, 2021.4.0, 2017.1.132, 2018.1.163, 11.1.4.214, 2019.3.199, 2017.4.239, 11.3.4.258, 2020.1.217, 2021.2.0, 2018.3.222
+| align="center" | 11.1.4.214, 2017.4.239, 2020.1.217, 11.3.4.258, 2019.2.187, 2021.4.0, 2022.1.0, 2021.2.0, 2018.3.222, 2017.1.132, 2018.1.163, 2019.3.199
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel Math Kernel Library is a library of highly optimized, extensively threaded math routines for science, engineering, and financial applications that require maximum performance. Core math functions include BLAS, LAPACK, ScaLAPACK, Sparse Solvers, Fast Fourier Transforms, Vector Math, and more. Homepage: http://software.intel.com/en-us/intel-mkl/ URL: http://software.intel.com/en-us/intel-mkl/ Keyword:math<br /><br /></div>
 |-
@@ Line 1,185: / Line 1,185: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2016.4, 2017.1, 2014.6, 2021.2.0, 2017.5, 2018.3, 2019.3, 2022.1.0, 2020.1.217
+| align="center" | 2020.1.217, 2019.3, 2022.1.0, 2014.6, 2016.4, 2017.5, 2017.1, 2021.2.0, 2018.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel Cluster Toolkit Compiler Edition provides Intel C,C++ and fortran compilers, Intel MPI and Intel MKL Homepage: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/ URL: http://software.intel.com/en-us/intel-cluster-toolkit-compiler/ Keyword:tools<br /><br /></div>
 |-
@@ Line 1,197: / Line 1,197: @@
 | align="center" | mpi
 | align="center" |
-| align="center" | 2019.3.199, 2018.3.222
+| align="center" | 2018.3.222, 2019.3.199
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel MPI Library, compatible with MPICH ABI. Note: like Open MPI, this module's mpicc calls the toolchain compiler. mpiicc calls icc, and mpigcc calls gcc, and similar for C++ and Fortran. Homepage: http://software.intel.com/en-us/intel-mpi-library/<br /><br /></div>
 |-
@@ Line 1,209: / Line 1,209: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 5.64-96.0, 5.56-89.0, 5.52-86.0, 5.50-84.0, 5.40-77.0, 5.63-95.0, 5.53-87.0, 5.23-62.0, 5.55-88.0
+| align="center" | 5.53-87.0, 5.55-88.0, 5.64-96.0, 5.40-77.0, 5.52-86.0, 5.23-62.0, 5.63-95.0, 5.50-84.0, 5.56-89.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: InterProScan is a sequence analysis application (nucleotide and protein sequences) that combines different protein signature recognition methods into one resource. Homepage: http://www.ebi.ac.uk/interpro/ URL: http://www.ebi.ac.uk/interpro/ Keyword:bio<br /><br /></div>
 |-
@@ Line 1,221: / Line 1,221: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 9.0.4, 2020.1.217, 2017.1.132
+| align="center" | 2020.1.217, 9.0.4, 2017.1.132
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel Integrated Performance Primitives (Intel IPP) is an extensive library of multicore-ready, highly optimized software functions for multimedia, data processing, and communications applications. Intel IPP offers thousands of optimized functions covering frequently used fundamental algorithms. Homepage: https://software.intel.com/en-us/articles/intel-ipp/ URL: https://software.intel.com/en-us/articles/intel-ipp/ Keyword:tools<br /><br /></div>
 |-
@@ Line 1,227: / Line 1,227: @@
 | align="center" | -
 | align="center" |
-| align="center" | 2.7, 3.6, 3.7, 3.8, 3.5
+| align="center" | 2.7, 3.7, 3.6, 3.5, 3.8
-| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: IPython kernelspec for Python 3.5 Homepage: https://ipython.org/ URL: https://ipython.org/<br /><br /></div>
+| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: IPython kernelspec for Python 3.8 Homepage: https://ipython.org/ URL: https://ipython.org/<br /><br /></div>
 |-
 | align="center" | [http://www.iqtree.org/ iq-tree]
@@ Line 1,239: / Line 1,239: @@
 | align="center" | -
 | align="center" |
-| align="center" | 1.10.0, 1.18.0, 1.13.0
+| align="center" | 1.13.0, 1.10.0, 1.18.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel SPMD Program Compilers; An open-source compiler for high-performance SIMD programming on the CPU. ispc is a compiler for a variant of the C programming language, with extensions for 'single program, multiple data' (SPMD) programming. Under the SPMD model, the programmer writes a program that generally appears to be a regular serial program, though the execution model is actually that a number of program instances execute in parallel on the hardware. Homepage: http://ispc.github.io/ , https://github.com/ispc/ispc/ URL: http://ispc.github.io/ , https://github.com/ispc/ispc/<br /><br /></div>
 |-
@@ Line 1,251: / Line 1,251: @@
 | align="center" | math
 | align="center" |
-| align="center" | 4.2.0, 4.3.0
+| align="center" | 4.3.0, 4.2.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: JAGS is Just Another Gibbs Sampler. It is a program for analysis of Bayesian hierarchical models using Markov Chain Monte Carlo (MCMC) simulation Homepage: http://mcmc-jags.sourceforge.net/ URL: http://mcmc-jags.sourceforge.net/ Keyword:math<br /><br /></div>
 |-
@@ Line 1,263: / Line 1,263: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.8.0_121, 1.8.0_192, 13.0.1, 14.0.2, 11.0.16_8, 13.0.2, 1.7.0_80, 11.0.2, 17.0.2
+| align="center" | 1.8.0_192, 11.0.16_8, 17.0.2, 13.0.1, 1.8.0_121, 1.7.0_80, 14.0.2, 11.0.2, 13.0.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Java Platform, Standard Edition (Java SE) lets you develop and deploy Java applications on desktops and servers. Homepage: https://openjdk.java.net URL: https://openjdk.java.net Keyword:tools<br /><br /></div>
 |-
@@ Line 1,275: / Line 1,275: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.1.1, 0.6.0, 0.5.1, 1.0.2, 1.0.0, 1.3.0, 1.1.0, 1.2.0
+| align="center" | 0.5.1, 1.2.0, 1.1.1, 0.6.0, 1.0.0, 1.3.0, 1.0.2, 1.1.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: A high-level, high-performance dynamic language for technical computing. Homepage: http://julialang.org URL: http://julialang.org Keyword:tools<br /><br /></div>
 |-
@@ Line 1,317: / Line 1,317: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 20170811, 20170331
+| align="center" | 20170331, 20170811
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: LAMMPS (Large-scale Atomic/Molecular Massively Parallel Simulator) is a classical molecular dynamics simulation. LAMMPS has potentials for solid-state materials (metals, semiconductors) and soft matter (biomolecules, polymers) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. It can be coupled to various programs. The following packages are not included within this version: -MSCG, -GPU, -KOKKOS, -KIM, -USER-QUIP, -USER-INTEL, -USER-VTK Homepage: http://lammps.sandia.gov/ Keyword:chem<br /><br /></div>
 |-
@@ Line 1,323: / Line 1,323: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 20170811, 20170331
+| align="center" | 20170331, 20170811
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: LAMMPS (Large-scale Atomic/Molecular Massively Parallel Simulator) is a classical molecular dynamics simulation. LAMMPS has potentials for solid-state materials (metals, semiconductors) and soft matter (biomolecules, polymers) and coarse-grained or mesoscopic systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the atomic, meso, or continuum scale. It can be coupled to various programs. The following packages are not included within this version: -MSCG, -GPU, -KOKKOS, -KIM, -USER-QUIP, -USER-VTK, -QEQ, -USER-ATC, -MANYBODY Homepage: http://lammps.sandia.gov/ Keyword:chem<br /><br /></div>
 |-
@@ Line 1,398: / Line 1,398: @@
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: libHaru is a free, cross platform, open source library for generating PDF files. Homepage: http://libharu.org/ URL: http://libharu.org/<br /><br /></div>
 |-
-| align="center" | [https://github.com/evaleev/libint libint]
+| align="center" | [https://sourceforge.net/p/libint/ libint]
 | align="center" | chem
 | align="center" |
-| align="center" | 1.1.6, 2.2.0
+| align="center" | 2.2.0, 1.1.6
-| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory. - Homepage: https://github.com/evaleev/libint Keyword:chem<br /><br /></div>
+| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Libint library is used to evaluate the traditional (electron repulsion) and certain novel two-body matrix elements (integrals) over Cartesian Gaussian functions used in modern atomic and molecular theory. - Homepage: https://sourceforge.net/p/libint/ Keyword:chem<br /><br /></div>
 |-
 | align="center" | [https://github.com/libMesh/libmesh libmesh]
@@ Line 1,437: / Line 1,437: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 3.0.0, 4.2.1, 4.2.3, 4.3.4
+| align="center" | 4.2.1, 4.3.4, 4.2.3, 3.0.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Libxc is a library of exchange-correlation functionals for density-functional theory. The aim is to provide a portable, well tested and reliable set of exchange and correlation functionals. Homepage: http://www.tddft.org/programs/octopus/wiki/index.php/Libxc URL: http://www.tddft.org/programs/octopus/wiki/index.php/Libxc Keyword:chem<br /><br /></div>
 |-
@@ Line 1,491: / Line 1,491: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 5.2.1, 7.0.0
+| align="center" | 7.0.0, 5.2.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: LS-OPT is a standalone Design Optimization and Probabilistic Analysis package with an interface to LS-DYNA. Homepage: http://www.lstc.com/products/ls-opt URL: http://www.lstc.com/products/ls-opt Keyword:phys<br /><br /></div>
 |-
@@ Line 1,497: / Line 1,497: @@
 | align="center" | -
 | align="center" |
-| align="center" | 4.8.11, 4.9.9, 4.7.8, 4.7.13
+| align="center" | 4.9.9, 4.8.11, 4.7.13, 4.7.8
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: LS-PrePost is an advanced pre and post-processor that is delivered free with LS-DYNA. Homepage: http://lstc.com/products/ls-prepost URL: http://lstc.com/products/ls-prepost<br /><br /></div>
 |-
@@ Line 1,551: / Line 1,551: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 10.1.21, 10.4.11
+| align="center" | 10.4.11, 10.1.21
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: MariaDB An enhanced, drop-in replacement for MySQL For more information please take a look at https://docs.computecanada.ca/wiki/Database_servers. Homepage: https://mariadb.org/ URL: https://mariadb.org/ Extensions: DBD::mysql-4.050, Devel::CheckLib-1.13, IO::CaptureOutput-1.1104 Keyword:tools<br /><br /></div>
 |-
@@ Line 1,569: / Line 1,569: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2020b.4, 2021a.5, 2018b, 2017a, 2016b, 2018a, 2019b, 2019a, 2020a, 2020b.6, 2014a, 2021b.3, 2022b.2, 2021a.1, 2023a.3, 2022a
+| align="center" | 2021a.1, 2020b.4, 2020a, 2023a.3, 2021a.5, 2022b.2, 2020b.6, 2022a, 2021b.3, 2014a, 2019a, 2016b, 2019b, 2018b, 2017a, 2018a
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: MATLAB is a high-level language and interactive environment that enables you to perform computationally intensive tasks faster than with traditional programming languages such as C, C++, and Fortran. Homepage: https://www.mathworks.com/products/matlab URL: https://www.mathworks.com/products/matlab Keyword:tools<br /><br /></div>
 |-
@@ Line 1,587: / Line 1,587: @@
 | align="center" | tools
 | align="center" |
-| align="center" | R2019a, R2020a, R2014b, R2013b, R2017a, R2017b, R2018b, R2019b, R2015b, R2016a, R2014a, R2018a, R2022b, R2013a, R2016b, R2021b, R2020b, R2015a
+| align="center" | R2020b, R2018a, R2021b, R2020a, R2022b, R2013b, R2016b, R2017a, R2019b, R2019a, R2014b, R2017b, R2013a, R2015a, R2015b, R2016a, R2014a, R2018b
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The MATLAB Runtime is a standalone set of shared libraries that enables the execution of compiled MATLAB applications or components on computers that do not have MATLAB installed. Homepage: https://www.mathworks.com/products/compiler/mcr/ URL: https://www.mathworks.com/products/compiler/mcr/ Keyword:tools<br /><br /></div>
 |-
@@ Line 1,683: / Line 1,683: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.1.5, 2.1.10, 3.0.13, 4.1.2
+| align="center" | 4.1.2, 2.1.10, 3.0.13, 2.1.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: MiXCR is a universal framework that processes big immunome data from raw sequences to quantitated clonotypes. MiXCR efficiently handles paired- and single-end reads, considers sequence quality, corrects PCR errors and identifies germline hypermutations. The software supports both partial- and full-length profiling and employs all available RNA or DNA information, including sequences upstream of V and downstream of J gene segments. Homepage: http://mixcr.readthedocs.io/en/latest/quickstart.html URL: http://mixcr.readthedocs.io/en/latest/quickstart.html Keyword:bio<br /><br /></div>
 |-
@@ Line 1,695: / Line 1,695: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 4.6.2.7, 5.4.0.56, 5.16.0.179
+| align="center" | 5.16.0.179, 4.6.2.7, 5.4.0.56
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: An open source, cross-platform, implementation of C# and the CLR that is binary compatible with Microsoft.NET. Homepage: http://www.mono-project.com/ URL: http://www.mono-project.com/ Keyword:tools<br /><br /></div>
 |-
@@ Line 1,713: / Line 1,713: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.0.3, 3.1.3, 3.0.0
+| align="center" | 3.0.0, 3.0.3, 3.1.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: MPI for Python (mpi4py) provides bindings of the Message Passing Interface (MPI) standard for the Python programming language, allowing any Python program to exploit multiple processors. Homepage: https://bitbucket.org/mpi4py/mpi4py URL: https://bitbucket.org/mpi4py/mpi4py Compatible modules: python/2.7, python/3.6, python/3.7, python/3.8, python/3.9, python/3.10, python/3.11 Keyword:tools<br /><br /></div>
 |-
@@ Line 1,737: / Line 1,737: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 4.0.0beta2, 3.23
+| align="center" | 3.23, 4.0.0beta2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. AMOS makes use of it. Homepage: http://mummer.sourceforge.net/ Keyword:bio<br /><br /></div>
 |-
@@ Line 1,797: / Line 1,797: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2.7.8, 2.11.4, 2.8.4
+| align="center" | 2.11.4, 2.8.4, 2.7.8
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The NVIDIA Collective Communications Library (NCCL) implements multi-GPU and multi-node collective communication primitives that are performance optimized for NVIDIA GPUs. Homepage: https://developer.nvidia.com/nccl URL: https://developer.nvidia.com/nccl Keyword:tools<br /><br /></div>
 |-
@@ Line 1,857: / Line 1,857: @@
 | align="center" | io
 | align="center" |
-| align="center" | 4.4.4, 4.5.1
+| align="center" | 4.5.1, 4.4.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: NetCDF (network Common Data Form) is a set of software libraries and machine-independent data formats that support the creation, access, and sharing of array-oriented scientific data. Homepage: http://www.unidata.ucar.edu/software/netcdf/ URL: http://www.unidata.ucar.edu/software/netcdf/ Keyword:io<br /><br /></div>
 |-
@@ Line 1,881: / Line 1,881: @@
 | align="center" | -
 | align="center" |
-| align="center" | 23.04.3, 20.10.0, 19.10.0, 22.10.8, 21.10.3, 19.04.0, 22.10.6, 20.04.1, 21.04.3, 22.04.3
+| align="center" | 21.10.3, 19.10.0, 20.10.0, 20.04.1, 22.10.6, 21.04.3, 23.04.3, 22.04.3, 22.10.8, 19.04.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Nextflow is a reactive workflow framework and a programming DSL that eases writing computational pipelines with complex data Homepage: https://www.nextflow.io/ URL: https://www.nextflow.io/<br /><br /></div>
 |-
@@ Line 1,887: / Line 1,887: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 0.5.4, 0.5.0
+| align="center" | 0.5.0, 0.5.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: NextGenMap (NGM) is a flexible and fast read mapping program that is more than twice as fast as BWA, while achieving a mapping sensitivity similar to Stampy or Bowtie2. Homepage: http://cibiv.github.io/NextGenMap/ Keyword:bio<br /><br /></div>
 |-
@@ Line 1,947: / Line 1,947: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 23.7, 22.7, 22.1, 20.7
+| align="center" | 20.7, 23.7, 22.7, 22.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: C, C++ and Fortran compilers included with the NVIDIA HPC SDK (previously: PGI) Homepage: https://developer.nvidia.com/hpc-sdk/ URL: https://developer.nvidia.com/hpc-sdk/<br /><br /></div>
 |-
@@ Line 1,971: / Line 1,971: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 8.4, 9.1
+| align="center" | 9.1, 8.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Octopus is a scientific program aimed at the ab initio virtual experimentation on a hopefully ever-increasing range of system types. Electrons are described quantum-mechanically within density-functional theory (DFT), in its time-dependent form (TDDFT) when doing simulations in time. Nuclei are described classically as point particles. Electron-nucleus interaction is described within the pseudopotential approximation. Homepage: http://www.tddft.org/programs/octopus/wiki/index.php/Main_Page URL: http://www.tddft.org/programs/octopus/wiki/index.php/Main_Page Keyword:chem<br /><br /></div>
 |-
@@ Line 2,010: / Line 2,010: @@
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenEXR is a high dynamic-range (HDR) image file format developed by Industrial Light and Magic for use in computer imaging applications Homepage: http://www.openexr.com/ Keyword:vis<br /><br /></div>
 |-
-| align="center" | [https://www.openfoam.org/ openfoam]
+| align="center" | [https://www.openfoam.com/ openfoam]
 | align="center" | phys
 | align="center" |
-| align="center" | 3.0.1, 4.1, v2012, 5.0, v1906, 7, v1912, 6.20180813, v1812, 2.3.1, 2.2.2, 2.4.0
+| align="center" | 3.0.1, 2.2.2, 2.3.1, 4.1, v1812, 2.4.0, v2012, v1912, 7, 5.0, 6.20180813, v1906
-| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. Homepage: https://www.openfoam.org/ URL: https://www.openfoam.org/ Keyword:phys<br /><br /></div>
+| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. Homepage: https://www.openfoam.com/ URL: https://www.openfoam.com/ Keyword:phys<br /><br /></div>
 |-
 | align="center" | [http://www.extend-project.de/ openfoam-extend]
@@ Line 2,043: / Line 2,043: @@
 | align="center" | mpi
 | align="center" |
-| align="center" | 2.1.1, 2.0.2, 1.8.8, 4.0.1, 4.0.3, 1.6.5, 3.1.2
+| align="center" | 4.0.1, 2.0.2, 2.1.1, 4.0.3, 3.1.2, 1.8.8, 1.6.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Open MPI Project is an open source MPI-3 implementation. Homepage: https://www.open-mpi.org/ URL: https://www.open-mpi.org/ Keyword:mpi<br /><br /></div>
 |-
@@ Line 2,055: / Line 2,055: @@
 | align="center" | -
 | align="center" |
-| align="center" | 3.3, 3.4.1
+| align="center" | 3.4.1, 3.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenRefine is a power tool that allows you to load data, understand it, clean it up, reconcile it, and augment it with data coming from the web. Homepage: https://github.com/OpenRefine/OpenRefine URL: https://github.com/OpenRefine/OpenRefine<br /><br /></div>
 |-
@@ Line 2,079: / Line 2,079: @@
 | align="center" | -
 | align="center" |
-| align="center" | 7.7.0, 6.5.0
+| align="center" | 6.5.0, 7.7.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OptiX is NVIDIA SDK for easy ray tracing performance. It provides a simple framework for accessing the GPU's massive ray tracing power using state-of-the-art GPU algorithms. Homepage: https://developer.nvidia.com/optix URL: https://developer.nvidia.com/optix<br /><br /></div>
 |-
@@ Line 2,085: / Line 2,085: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 4.1.2, 3.0.3, 4.2.0, 4.0.1.2, 4.0.0.2
+| align="center" | 3.0.3, 4.2.0, 4.0.1.2, 4.1.2, 4.0.0.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of standard quantum chemical methods ranging from semiempirical methods to DFT to single- and multireference correlated ab initio methods. It can also treat environmental and relativistic effects. Homepage: http://cec.mpg.de/forum/ URL: http://cec.mpg.de/forum/ Keyword:chem<br /><br /></div>
 |-
@@ Line 2,157: / Line 2,157: @@
 | align="center" | vis
 | align="center" |
-| align="center" | 5.3.0, 5.5.2, 5.8.0
+| align="center" | 5.3.0, 5.8.0, 5.5.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: ParaView is a scientific parallel visualizer. Homepage: https://www.paraview.org URL: https://www.paraview.org Compatible modules: python/3.6, python/3.7, python/3.8 Keyword:vis<br /><br /></div>
 |-
@@ Line 2,193: / Line 2,193: @@
 | align="center" | -
 | align="center" |
-| align="center" | 8.39, 8.44
+| align="center" | 8.44, 8.39
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The PCRE library is a set of functions that implement regular expression pattern matching using the same syntax and semantics as Perl 5. Homepage: https://www.pcre.org/ URL: https://www.pcre.org/<br /><br /></div>
 |-
@@ Line 2,217: / Line 2,217: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.0.4, 1.0.5
+| align="center" | 1.0.5, 1.0.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PennCNV is a free software tool for Copy Number Variation (CNV) detection from SNP genotyping arrays. Currently it can handle signal intensity data from Illumina and Affymetrix arrays. With appropriate preparation of file format, it can also handle other types of SNP arrays and oligonucleotide arrays. Homepage: http://penncnv.openbioinformatics.org/en/latest/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,223: / Line 2,223: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 5.22.4, 5.16.3, 5.22.2, 5.30.2
+| align="center" | 5.30.2, 5.16.3, 5.22.2, 5.22.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Larry Wall's Practical Extraction and Report Language Homepage: https://www.perl.org/ URL: https://www.perl.org/ Extensions: Algorithm::Dependency-1.111, Algorithm::Diff-1.1903, aliased-0.34, AnyEvent-7.17, App::Cmd-0.331, App::cpanminus-1.7044, AppConfig-1.71, Archive::Extract-0.86, Array::Utils-0.5, Authen::SASL-2.16, AutoLoader-5.74, B::Hooks::EndOfScope-0.24, B::Lint-1.20, boolean-0.46, Canary::Stability-2013, Capture::Tiny-0.48, Carp-1.50, Carp::Clan-6.08, Carp::Heavy-1.50, Class::Accessor-0.51, Class::Data::Inheritable-0.08, Class::DBI-v3.0.17, Class::DBI::SQLite-0.11, Class::Inspector-1.36, Class::ISA-0.36, Class::Load-0.25, Class::Load::XS-0.10, Class::Singleton-1.5, Class::Trigger-0.14, Clone-0.43, Clone::Choose-0.010, Config::General-2.63, Config::INI-0.025, Config::MVP-2.200011, Config::Tiny-2.24, constant-1.33, CPANPLUS-0.9906, Crypt::DES-2.07, Crypt::Rijndael-1.14, Cwd-3.75, Cwd::Guard-0.05, Data::Dump-1.23, Data::Dumper-2.173, Data::Dumper::Concise-2.023, Data::Grove-0.08, Data::OptList-0.110, Data::Section-0.200007, Data::Section::Simple-0.07, Data::Stag-0.14, Data::Types-0.17, Data::UUID-1.224, Date::Handler-1.2, Date::Language-2.32, DateTime-1.52, DateTime::Locale-1.25, DateTime::TimeZone-2.38, DateTime::Tiny-1.07, DBD::SQLite-1.64, DBI-1.643, DBIx::Admin::TableInfo-3.03, DBIx::ContextualFetch-1.03, DBIx::Simple-1.37, Devel::CheckCompiler-0.07, Devel::CheckLib-1.14, Devel::GlobalDestruction-0.14, Devel::OverloadInfo-0.005, Devel::StackTrace-2.04, Digest::HMAC-1.03, Digest::MD5::File-0.08, Digest::SHA1-2.13, Dist::CheckConflicts-0.11, Dist::Zilla-6.014, Email::Date::Format-1.005, Encode-3.04, Encode::Locale-1.05, Error-0.17029, Eval::Closure-0.14, Exception::Class-1.44, Expect-1.35, Exporter-5.74, Exporter::Declare-0.114, Exporter::Tiny-1.002001, ExtUtils::CBuilder-0.280234, ExtUtils::Config-0.008, ExtUtils::Constant-0.25, ExtUtils::CppGuess-0.21, ExtUtils::Helpers-0.026, ExtUtils::InstallPaths-0.012, ExtUtils::MakeMaker-7.44, ExtUtils::ParseXS-3.35, Fennec::Lite-0.004, File::CheckTree-4.42, File::Copy::Recursive-0.45, File::Copy::Recursive::Reduced-0.006, File::Find::Rule-0.34, File::Find::Rule::Perl-1.15, File::Grep-0.02, File::HomeDir-1.004, File::Listing-6.04, File::Next-1.18, File::Path-2.16, File::pushd-1.016, File::Remove-1.58, File::ShareDir-1.116, File::ShareDir::Install-0.13, File::Slurp-9999.30, File::Slurp::Tiny-0.004, File::Slurper-0.012, File::Spec-3.75, File::Temp-0.2309, File::Which-1.23, Font::TTF-1.06, Getopt::Long-2.51, Getopt::Long::Descriptive-0.105, Git-0.42, GO-0.04, GO::Utils-0.15, Graph-0.9704, Graph::ReadWrite-2.09, Hash::Merge-0.300, HTML::Entities::Interpolate-1.10, HTML::Form-6.07, HTML::Parser-3.72, HTML::Tagset-3.20, HTML::Tree-5.07, HTTP::Cookies-6.08, HTTP::Daemon-6.06, HTTP::Date-6.05, HTTP::Negotiate-6.01, HTTP::Request-6.22, HTTP::Tiny-0.076, if-0.0608, Ima::DBI-0.35, Import::Into-1.002005, IO::File-1.42, IO::Handle-1.42, IO::HTML-1.001, IO::Seekable-1.42, IO::Select-1.42, IO::Socket-1.42, IO::Socket::SSL-2.067, IO::String-1.08, IO::Stringy-2.113, IO::Tty-1.14, IPC::Cmd-1.04, IPC::Run-20180523.0, IPC::Run3-0.048, JSON-4.02, Lingua::EN::PluralToSingular-0.21, List::AllUtils-0.16, List::MoreUtils-0.428, List::SomeUtils-0.58, List::Util-1.54, List::UtilsBy-0.11, Locale::Maketext::Simple-0.21, Log::Dispatch-2.69, Log::Dispatchouli-2.019, Log::Handler-0.88, Log::Log4perl-1.49, Log::Message-0.08, Log::Message::Simple-0.10, Logger::Simple-2.0, LWP::MediaTypes-6.04, LWP::Protocol::https-6.07, LWP::Simple-6.43, Mail::Util-2.21, Math::Bezier-0.01, Math::CDF-0.1, Math::Round-0.07, Math::VecStat-0.08, MCE::Mutex-1.866, Meta::Builder-0.004, MIME::Base64-3.15, MIME::Lite-3.031, MIME::Types-2.17, Mixin::Linewise::Readers-0.108, Mock::Quick-1.111, Module::Build-0.4231, Module::Build::Tiny-0.039, Module::Build::XSUtil-0.19, Module::CoreList-5.20200314, Module::Implementation-0.09, Module::Install-1.19, Module::Load-0.34, Module::Load::Conditional-0.70, Module::Metadata-1.000037, Module::Pluggable-5.2, Module::Runtime-0.016, Moo-2.003006, Moose-2.2012, MooseX::LazyRequire-0.11, MooseX::OneArgNew-0.005, MooseX::Role::Parameterized-1.11, MooseX::SetOnce-0.200002, MooseX::Types-0.50, MooseX::Types::Perl-0.101343, Mouse-v2.5.9, Mozilla::CA-20180117, MRO::Compat-0.13, namespace::autoclean-0.29, namespace::clean-0.27, Net::Domain-3.11, Net::HTTP-6.19, Net::SMTP::SSL-1.04, Net::SNMP-v6.0.1, Net::SSLeay-1.88, Number::Compare-0.03, Number::Format-1.75, Object::Accessor-0.48, Object::InsideOut-4.05, Package::Constants-0.06, Package::DeprecationManager-0.17, Package::Stash-0.38, Package::Stash::XS-0.29, Parallel::ForkManager-2.02, Params::Check-0.38, Params::Util-1.07, Params::Validate-1.29, Params::ValidationCompiler-0.30, parent-0.238, Parse::RecDescent-1.967015, Path::Tiny-0.112, PDF::API2-2.037, Perl::OSType-1.010, PerlIO::utf8_strict-0.007, Pod::Elemental-0.103005, Pod::Escapes-1.07, Pod::Eventual-0.094001, Pod::LaTeX-0.61, Pod::Man-4.14, Pod::Plainer-1.04, Pod::POM-2.01, Pod::Simple-3.40, Pod::Weaver-4.015, Readonly-2.05, Regexp::Common-2017060201, Role::HasMessage-0.006, Role::Identifiable::HasIdent-0.007, Role::Tiny-2.001004, Scalar::List::Utils-1.54, Scalar::Util-1.54, Scalar::Util::Numeric-0.40, Set::Array-0.30, Set::IntervalTree-0.12, Set::IntSpan-1.19, Set::IntSpan::Fast-1.15, Set::Scalar-1.29, Shell-0.73, Socket-2.029, Software::License-0.103014, Specio-0.46, SQL::Abstract-1.86, SQL::Statement-1.412, Statistics::Basic-1.6611, Statistics::Descriptive-3.0702, Storable-3.15, strictures-2.000006, String::Flogger-1.101245, String::RewritePrefix-0.008, String::Truncate-1.100602, Sub::Exporter-0.987, Sub::Exporter::ForMethods-0.100052, Sub::Exporter::Progressive-0.001013, Sub::Identify-0.14, Sub::Install-0.928, Sub::Name-0.26, Sub::Quote-2.006006, Sub::Uplevel-0.2800, Sub::Uplevel-0.2800, SVG-2.84, Switch-2.17, Template-3.007, Template::Plugin::Number::Format-1.06, Term::Encoding-0.03, Term::ReadKey-2.38, Term::ReadLine::Gnu-1.36, Term::UI-0.46, Test-1.26, Test::ClassAPI-1.07, Test::Deep-1.130, Test::Differences-0.67, Test::Exception-0.43, Test::Fatal-0.014, Test::Harness-3.42, Test::LeakTrace-0.16, Test::More-1.302172, Test::Most-0.35, Test::NoWarnings-1.04, Test::Output-1.031, Test::Pod-1.52, Test::Requires-0.10, Test::RequiresInternet-0.05, Test::Simple-1.302172, Test::Version-2.09, Test::Warn-0.36, Test::Warnings-0.029, Text::Aligner-0.13, Text::Balanced-2.03, Text::CSV-2.00, Text::Diff-1.45, Text::Format-0.61, Text::Glob-0.11, Text::Iconv-1.7, Text::ParseWords-3.30, Text::Soundex-3.05, Text::Table-1.133, Text::Template-1.58, Thread::Queue-3.13, Throwable-0.200013, Tie::Function-0.02, Tie::IxHash-1.23, Time::HiRes-1.9760, Time::Local-1.30, Time::Piece-1.34, Time::Piece::MySQL-0.06, Tree::DAG_Node-1.31, Try::Tiny-0.30, UNIVERSAL::moniker-0.08, URI-1.76, URI::Escape-3.31, version-0.9924, Want-0.29, WWW::RobotRules-6.02, XML::Bare-0.53, XML::DOM-1.46, XML::Filter::BufferText-1.01, XML::NamespaceSupport-1.12, XML::Parser-2.46, XML::RegExp-0.04, XML::SAX-1.02, XML::SAX::Base-1.09, XML::SAX::Writer-0.57, XML::Simple-2.25, XML::Tiny-2.07, XML::Twig-3.52, XML::XPath-1.44, XSLoader-0.24, YAML-1.30, YAML::Tiny-1.73 Keyword:tools<br /><br /></div>
 |-
@@ Line 2,235: / Line 2,235: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.8.2, 3.7.5, 3.9.0, 3.10.2, 3.11.3
+| align="center" | 3.9.0, 3.11.3, 3.7.5, 3.10.2, 3.8.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. Homepage: http://www.mcs.anl.gov/petsc URL: http://www.mcs.anl.gov/petsc Keyword:tools<br /><br /></div>
 |-
@@ Line 2,247: / Line 2,247: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.9.0, 3.11.3, 3.10.4
+| align="center" | 3.9.0, 3.10.4, 3.11.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations. Homepage: http://www.mcs.anl.gov/petsc URL: http://www.mcs.anl.gov/petsc Keyword:tools<br /><br /></div>
 |-
@@ Line 2,259: / Line 2,259: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 16.9, 17.3, 13.10, 19.4
+| align="center" | 19.4, 13.10, 16.9, 17.3
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: C, C++ and Fortran compilers from The Portland Group - PGI Homepage: http://www.pgroup.com/ URL: http://www.pgroup.com/<br /><br /></div>
 |-
@@ Line 2,265: / Line 2,265: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.18.9, 2.1.1, 2.23.2, 2.17.3, 2.10.7, 2.26.3, 2.20.6, 2.23.3
+| align="center" | 2.26.3, 2.23.3, 2.1.1, 2.17.3, 2.23.2, 2.18.9, 2.10.7, 2.20.6
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: A set of tools (in Java) for working with next generation sequencing data in the BAM (http://samtools.github.io/hts-specs) format. Homepage: http://broadinstitute.github.io/picard/ URL: http://broadinstitute.github.io/picard/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,271: / Line 2,271: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.23, 1.24, 1.22
+| align="center" | 1.23, 1.22, 1.24
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Pilon is an automated genome assembly improvement and variant detection tool To run pilon, please use: java -jar $EBROOTPILON/pilon-1.22.jar ... Use -Xmx Java option to adjust memory as in: java -Xmx8G -jar $EBROOTPILON/pilon-1.22.jar ... Homepage: https://github.com/broadinstitute/pilon Keyword:bio<br /><br /></div>
 |-
@@ Line 2,283: / Line 2,283: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.9b_6.21-x86_64, 2.00a2.3_x86_64, 2.00-10252019-avx2, 1.9b_5.2-x86_64, 1.07, 1.9b_4.1-x86_64
+| align="center" | 2.00-10252019-avx2, 1.07, 1.9b_5.2-x86_64, 2.00a2.3_x86_64, 1.9b_6.21-x86_64, 1.9b_4.1-x86_64
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner. The focus of PLINK is purely on analysis of genotype/phenotype data, so there is no support for steps prior to this (e.g. study design and planning, generating genotype or CNV calls from raw data). Through integration with gPLINK and Haploview, there is some support for the subsequent visualization, annotation and storage of results. Homepage: http://pngu.mgh.harvard.edu/~purcell/plink/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,289: / Line 2,289: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 2.3.0, 2.4.2, 2.3.2
+| align="center" | 2.3.2, 2.3.0, 2.4.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PLUMED is an open source library for free energy calculations in molecular systems which works together with some of the most popular molecular dynamics engines. Free energy calculations can be performed as a function of many order parameters with a particular focus on biological problems, using state of the art methods such as metadynamics, umbrella sampling and Jarzynski-equation based steered MD. The software, written in C++, can be easily interfaced with both fortran and C/C++ codes. Homepage: http://www.plumed-code.org Keyword:chem<br /><br /></div>
 |-
@@ Line 2,313: / Line 2,313: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 12.1, 10.2, 11.6, 9.6.6
+| align="center" | 10.2, 11.6, 12.1, 9.6.6
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PostgreSQL is a powerful, open source object-relational database system. It is fully ACID compliant, has full support for foreign keys, joins, views, triggers, and stored procedures (in multiple languages). It includes most SQL:2008 data types, including INTEGER, NUMERIC, BOOLEAN, CHAR, VARCHAR, DATE, INTERVAL, and TIMESTAMP. It also supports storage of binary large objects, including pictures, sounds, or video. It has native programming interfaces for C/C++, Java, .Net, Perl, Python, Ruby, Tcl, ODBC, among others, and exceptional documentation. Homepage: https://www.postgresql.org/ URL: https://www.postgresql.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,343: / Line 2,343: @@
 | align="center" | geo
 | align="center" |
-| align="center" | 4.9.3, 6.0.0, 7.0.0, 6.3.0
+| align="center" | 4.9.3, 6.3.0, 6.0.0, 7.0.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Program proj is a standard Unix filter function which converts geographic longitude and latitude coordinates into cartesian coordinates Homepage: http://trac.osgeo.org/proj/ URL: http://trac.osgeo.org/proj/ Keyword:geo<br /><br /></div>
 |-
@@ Line 2,349: / Line 2,349: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.9.1, 3.6.1, 3.7.1, 3.3.0, 3.11.1
+| align="center" | 3.6.1, 3.7.1, 3.3.0, 3.11.1, 3.9.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Google Protocol Buffers Homepage: https://github.com/google/protobuf/ URL: https://github.com/google/protobuf/ Compatible modules: python/2.7.14, python/3.5.4, python/3.6.3, python/3.7.4, python/3.8.0 Keyword:tools<br /><br /></div>
 |-
@@ Line 2,355: / Line 2,355: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 7.3.3, 5.8, 5.8.0
+| align="center" | 7.3.3, 5.8.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PyPy is a fast, compliant alternative implementation of the Python language (2.7.13 and 3.5.3). Homepage: https://pypy.org/index.html URL: https://pypy.org/index.html Keyword:tools<br /><br /></div>
 |-
@@ Line 2,361: / Line 2,361: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.8.0, 3.6.3, 3.7.0, 3.5.4, 2.7.14, 3.5.2, 3.8.2, 2.7.13, 3.7.4
+| align="center" | 3.6.3, 3.8.2, 3.7.0, 3.5.4, 2.7.14, 2.7.13, 3.7.4, 3.5.2, 3.8.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Python is a programming language that lets you work more quickly and integrate your systems more effectively. Homepage: http://python.org/ URL: http://python.org/ Extensions: gnureadline-8.0.0, pip-19.3.1, setuptools-41.6.0, virtualenv-16.7.7, wheel-0.33.6 Keyword:tools<br /><br /></div>
 |-
@@ Line 2,397: / Line 2,397: @@
 | align="center" | -
 | align="center" |
-| align="center" | 2021.11, 2023.5
+| align="center" | 2023.5, 2021.11
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: QIIME is an open-source bioinformatics pipeline for performing microbiome analysis from raw DNA sequencing data. Homepage: http://qiime2.org/ URL: http://qiime2.org/<br /><br /></div>
 |-
@@ Line 2,421: / Line 2,421: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 5.13.1, 5.12.3, 4.8.7, 5.11.3, 3.3.8, 5.6.1, 5.10.1, 5.9.6
+| align="center" | 5.12.3, 5.6.1, 5.11.3, 5.9.6, 3.3.8, 5.13.1, 4.8.7, 5.10.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Qt is a comprehensive cross-platform C++ application framework. Homepage: https://qt.io/ URL: https://qt.io/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,433: / Line 2,433: @@
 | align="center" | chem
 | align="center" |
-| align="center" | 6.4.1, 6.6, 6.0, 6.3, 6.1, 6.2.2
+| align="center" | 6.4.1, 6.2.2, 6.0, 6.3, 6.6, 6.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Quantum ESPRESSO is an integrated suite of computer codes for electronic-structure calculations and materials modeling at the nanoscale. It is based on density-functional theory, plane waves, and pseudopotentials (both norm-conserving and ultrasoft). Homepage: https://www.quantum-espresso.org URL: https://www.quantum-espresso.org Keyword:chem<br /><br /></div>
 |-
@@ Line 2,439: / Line 2,439: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.4.0, 3.5.0, 3.5.2, 3.3.3, 3.5.1, 3.6.0, 4.0.0, 4.0.2, 3.6.1
+| align="center" | 3.5.2, 3.5.1, 3.4.0, 3.3.3, 3.5.0, 3.6.1, 4.0.0, 3.6.0, 4.0.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: R is a free software environment for statistical computing and graphics. Homepage: http://www.r-project.org/ URL: http://www.r-project.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,529: / Line 2,529: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 5.34.36, 6.14.04, 6.08.02
+| align="center" | 6.08.02, 5.34.36, 6.14.04
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The ROOT system provides a set of OO frameworks with all the functionality needed to handle and analyze large amounts of data in a very efficient way. Homepage: http://root.cern.ch/drupal/ URL: http://root.cern.ch/drupal/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,553: / Line 2,553: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2.6.1, 2.3.1
+| align="center" | 2.3.1, 2.6.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Ruby is a dynamic, open source programming language with a focus on simplicity and productivity. It has an elegant syntax that is natural to read and easy to write. Homepage: https://www.ruby-lang.org URL: https://www.ruby-lang.org Extensions: addressable-2.4.0, arr-pm-0.0.10, backports-3.11.4, bundler-2.0.1, cabin-0.9.0, childprocess-1.0.1, clamp-1.3.0, connection_pool-2.2.2, diff-lcs-1.3, ethon-0.12.0, faraday-0.15.4, faraday_middleware-0.13.1, ffi-1.10.0, gh-0.15.1, highline-2.0.1, json-2.1.0, launchy-2.4.3, multi_json-1.13.1, multipart-post-2.0.0, mustermann-1.0.3, net-http-persistent-2.9.4, net-http-pipeline-1.0.1, public_suffix-3.0.3, pusher-client-0.6.2, rack-2.0.6, rack-protection-2.0.5, rack-test-1.1.0, rspec-3.8.0, rspec-core-3.8.0, rspec-expectations-3.8.2, rspec-mocks-3.8.0, rspec-support-3.8.0, sinatra-2.0.5, tilt-2.0.9, typhoeus-1.3.1, websocket-1.2.8 Keyword:tools<br /><br /></div>
 |-
@@ Line 2,565: / Line 2,565: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.47.0, 1.65.0, 1.28.0, 1.70.0, 1.59.0, 1.41.0, 1.53.0
+| align="center" | 1.65.0, 1.53.0, 1.70.0, 1.59.0, 1.47.0, 1.28.0, 1.41.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Rust is a systems programming language that runs blazingly fast, prevents segfaults, and guarantees thread safety. Homepage: https://www.rust-lang.org URL: https://www.rust-lang.org Keyword:tools<br /><br /></div>
 |-
@@ Line 2,589: / Line 2,589: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 0.8.0, 0.7.1, 0.6.7
+| align="center" | 0.6.7, 0.7.1, 0.8.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Sambamba is a high performance modern robust and fast tool (and library), written in the D programming language, for working with SAM and BAM files. Current functionality is an important subset of samtools functionality, including view, index, sort, markdup, and depth. Homepage: https://lomereiter.github.io/sambamba/ URL: https://lomereiter.github.io/sambamba/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,607: / Line 2,607: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.9, 0.1.20, 1.3.1, 1.5
+| align="center" | 0.1.20, 1.9, 1.3.1, 1.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: SAM Tools provide various utilities for manipulating alignments in the SAM format, including sorting, merging, indexing and generating alignments in a per-position format. Homepage: http://www.htslib.org/ URL: http://www.htslib.org/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,613: / Line 2,613: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 1.1.1, 1.3.13
+| align="center" | 1.3.13, 1.1.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: sbt is a build tool for Scala, Java, and more. It requires Java 1.8 or later. sbt uses a small number of concepts to support flexible and powerful build definitions. There are not that many concepts, but sbt is not exactly like other build systems and there are details you will stumble on if you haven t read the documentation. The Getting Started Guide covers the concepts you need to know to create and maintain an sbt build definition. It is highly recommended to read the Getting Started Guide. Homepage: http://www.scala-sbt.org/ URL: http://www.scala-sbt.org/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,625: / Line 2,625: @@
 | align="center" | math
 | align="center" |
-| align="center" | 2018b, 2019b, 2019a, 2017b
+| align="center" | 2019b, 2018b, 2019a, 2017b
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Bundle which contains the Scientific Python stack, including Cycler, mpmath, numpy, scipy, sympy, pandas, matplotlib, ipython_genutils, traitlets, ptyprocess, pathlib2, pickleshare, pexpect, simplegeneric, ipython, ipykernel, jupyter_client, jupyter_core, pyzmq, tornado, futures and ipyparallel. Homepage: http://python.org/ URL: http://python.org/ Keyword:math<br /><br /></div>
 |-
@@ Line 2,661: / Line 2,661: @@
 | align="center" | -
 | align="center" |
-| align="center" | 0.13.2, 0.15.0, 2.3.1
+| align="center" | 0.13.2, 2.3.1, 0.15.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: FASTA and FASTQ are basic and ubiquitous formats for storing nucleotide and protein sequences. Common manipulations of FASTA/Q file include converting, searching, filtering, deduplication, splitting, shuffling, and sampling. Existing tools only implement some of these manipulations, and not particularly efficiently, and some are only available for certain operating systems. Furthermore, the complicated installation process of required packages and running environments can render these programs less user friendly. This project describes a cross-platform ultrafast comprehensive toolkit for FASTA/Q processing. SeqKit provides executable binary files for all major operating systems, including Windows, Linux, and Mac OS X, and can be directly used without any dependencies or pre-configurations. SeqKit demonstrates competitive performance in execution time and memory usage compared to similar tools. The efficiency and usability of SeqKit enable researchers to rapidly accomplish common FASTA/Q file manipulations. Homepage: https://bioinf.shenwei.me/seqkit/ URL: https://bioinf.shenwei.me/seqkit/<br /><br /></div>
 |-
@@ Line 2,715: / Line 2,715: @@
 | align="center" | -
 | align="center" |
-| align="center" | 4.11.20210226, 4.10.1
+| align="center" | 4.10.1, 4.11.20210226
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: 3D Slicer is an open source software platform for medical image informatics, image processing, and three-dimensional visualization. Built over two decades through support from the National Institutes of Health and a worldwide developer community, Slicer brings free, powerful cross-platform processing tools to physicians, researchers, and the general public. Homepage: https://www.slicer.org/ URL: https://www.slicer.org/<br /><br /></div>
 |-
@@ Line 2,733: / Line 2,733: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 5.0, 4.3t
+| align="center" | 4.3t, 5.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: SnpEff is a variant annotation and effect prediction tool. It annotates and predicts the effects of genetic variants (such as amino acid changes). Homepage: https://pcingola.github.io/SnpEff/ URL: https://pcingola.github.io/SnpEff/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,757: / Line 2,757: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2.3.0, 2.2.0, 2.4.4, 2.1.0, 2.2.1, 3.0.0, 2.1.1, 3.3.0
+| align="center" | 2.1.1, 3.3.0, 3.0.0, 2.1.0, 2.3.0, 2.4.4, 2.2.0, 2.2.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Spark is Hadoop MapReduce done in memory Homepage: http://spark.apache.org URL: http://spark.apache.org Keyword:tools<br /><br /></div>
 |-
@@ Line 2,781: / Line 2,781: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.8.2-1, 2.9.6
+| align="center" | 2.9.6, 2.8.2-1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The NCBI SRA Toolkit enables reading (dumping) of sequencing files from the SRA database and writing (loading) files into the .sra format Homepage: http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=std Keyword:bio<br /><br /></div>
 |-
@@ Line 2,799: / Line 2,799: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 1.46, 1.45
+| align="center" | 1.45, 1.46
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography. Homepage: http://catchenlab.life.illinois.edu/stacks/ Keyword:bio<br /><br /></div>
 |-
@@ Line 2,805: / Line 2,805: @@
 | align="center" | phys
 | align="center" |
-| align="center" | 14.02.012-R8, 11.06.011-R8, 13.06.012-R8, 14.04.013-R8, 14.06.013-R8, 13.04.010-R8, 12.04.011-R8, 17.06.007-R8, 16.06.008-R8, 15.04.010-R8, 17.04.008-R8, 16.02.008-R8, 17.02.007-R8, 18.06.006-R8, 17.04.007-R8, 16.04.012-R8, 12.06.011-R8, 18.02.008-R8, 18.04.008-R8, 17.02.008-R8, 16.02.009-R8, 17.06.008-R8, 16.04.007-R8
+| align="center" | 18.06.006-R8, 16.06.008-R8, 17.02.007-R8, 17.04.007-R8, 15.04.010-R8, 16.04.012-R8, 17.06.007-R8, 16.02.008-R8, 17.04.008-R8, 18.04.008-R8, 17.02.008-R8, 16.02.009-R8, 16.04.007-R8, 18.02.008-R8, 11.06.011-R8, 17.06.008-R8, 13.06.012-R8, 14.04.013-R8, 12.04.011-R8, 14.02.012-R8, 14.06.013-R8, 13.04.010-R8, 12.06.011-R8
-| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Predicting the real-world performance of a product requires simulation tools that span a variety of engineering disciplines. STAR-CCM+ is an all-in-one solution that delivers accurate and efficient multidisciplinary technologies in a single integrated user interface. This version uses double precision. Homepage: http://mdx.plm.automation.siemens.com/star-ccm-plus URL: http://mdx.plm.automation.siemens.com/star-ccm-plus Keyword:phys<br /><br /></div>
+| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Predicting the real-world performance of a product requires simulation tools that span a variety of engineering disciplines. STAR-CCM+ is an all-in-one solution that delivers accurate and efficient multidisciplinary technologies in a single integrated user interface. This verison uses double precision. Homepage: http://mdx.plm.automation.siemens.com/star-ccm-plus URL: http://mdx.plm.automation.siemens.com/star-ccm-plus Keyword:phys<br /><br /></div>
 |-
 | align="center" | [http://mdx.plm.automation.siemens.com/star-ccm-plus starccm-mixed]
 | align="center" | phys
 | align="center" |
-| align="center" | 12.06.011, 14.04.013, 12.04.011, 14.02.012, 11.06.011, 13.04.010, 14.06.013, 18.02.008, 17.04.008, 17.02.008, 17.06.007, 16.06.008, 16.02.008, 17.04.007, 13.06.012, 18.06.006, 18.04.008, 16.02.009, 15.04.010, 17.02.007, 16.04.012, 16.04.007, 17.06.008
+| align="center" | 16.02.009, 16.04.007, 16.02.008, 16.04.012, 17.02.007, 17.04.007, 17.06.008, 17.02.008, 18.06.006, 18.02.008, 17.06.007, 18.04.008, 13.04.010, 17.04.008, 13.06.012, 16.06.008, 15.04.010, 14.02.012, 14.04.013, 12.04.011, 12.06.011, 14.06.013, 11.06.011
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Predicting the real-world performance of a product requires simulation tools that span a variety of engineering disciplines. STAR-CCM+ is an all-in-one solution that delivers accurate and efficient multidisciplinary technologies in a single integrated user interface. This version uses mixed precision. Homepage: http://mdx.plm.automation.siemens.com/star-ccm-plus URL: http://mdx.plm.automation.siemens.com/star-ccm-plus Keyword:phys<br /><br /></div>
 |-
@@ Line 2,823: / Line 2,823: @@
 | align="center" | math
 | align="center" |
-| align="center" | 5.0.0, 6.2.0, 6.0.1, 7.0.0
+| align="center" | 6.0.1, 7.0.0, 5.0.0, 6.2.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: An open-source collection of software tools written in C++ for performing Partial Differential Equation (PDE) analysis and solving PDE-constrained optimization problems. The toolset is designed with computational fluid dynamics and aerodynamic shape optimization in mind. Homepage: http://su2.stanford.edu URL: http://su2.stanford.edu Keyword:math<br /><br /></div>
 |-
@@ Line 2,895: / Line 2,895: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 8.5.19, 8.6.8
+| align="center" | 8.6.8, 8.5.19
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Tcl (Tool Command Language) is a very powerful but easy to learn dynamic programming language, suitable for a very wide range of uses, including web and desktop applications, networking, administration, testing and many more. Homepage: http://www.tcl.tk/ Keyword:tools<br /><br /></div>
 |-
@@ Line 2,901: / Line 2,901: @@
 | align="center" | -
 | align="center" |
-| align="center" | 6.0.1.5, 8.6.1.6
+| align="center" | 8.6.1.6, 6.0.1.5
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: NVIDIA TensorRT is a platform for high-performance deep learning inference Homepage: https://developer.nvidia.com/tensorrt URL: https://developer.nvidia.com/tensorrt Compatible modules: python/3.8, python/3.9, python/3.10, python/3.11<br /><br /></div>
 |-
@@ Line 2,925: / Line 2,925: @@
 | align="center" | ai
 | align="center" |
-| align="center" | 20170530, 20170731
+| align="center" | 20170731, 20170530
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Torch is a scientific computing framework with wide support for machine learning algorithms that puts GPUs first. It is easy to use and efficient, thanks to an easy and fast scripting language, LuaJIT, and an underlying C/CUDA implementation. Homepage: http://torch.ch/ Keyword:ai<br /><br /></div>
 |-
@@ Line 2,979: / Line 2,979: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.8.4, 2.5.0, 2.4.0
+| align="center" | 2.4.0, 2.8.4, 2.5.0
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Trinity represents a novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-Seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-Seq reads. - Homepage: http://trinityrnaseq.github.io/ Keyword:bio<br /><br /></div>
 |-
@@ Line 3,057: / Line 3,057: @@
 | align="center" | bio
 | align="center" |
-| align="center" | 2.4.11, 2.4.10, 2.4.9
+| align="center" | 2.4.11, 2.4.9, 2.4.10
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures. Homepage: http://www.tbi.univie.ac.at/RNA/ Keyword:bio<br /><br /></div>
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@@ Line 3,093: / Line 3,093: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 2019.3, 2018.3, 2020.1, 2022.2
+| align="center" | 2022.2, 2019.3, 2018.3, 2020.1
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Intel VTune Profiler is a performance analysis tool for C, C++, C#, Fortran, Java, Python, Go, DPC++, and OpenCL. Homepage: https://software.intel.com/content/www/us/en/develop/tools/oneapi/components/vtune-profiler.html URL: https://software.intel.com/content/www/us/en/develop/tools/oneapi/components/vtune-profiler.html Keyword:tools<br /><br /></div>
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@@ Line 3,099: / Line 3,099: @@
 | align="center" | -
 | align="center" |
-| align="center" | 3.1.4, 4.0.3
+| align="center" | 4.0.3, 3.1.4
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Workbench Analysis Sequence Processor (WASP) was developed to streamline lexing, parsing, access, validation, and analysis of ascii text files. Homepage: https://code.ornl.gov/neams-workbench/wasp URL: https://code.ornl.gov/neams-workbench/wasp<br /><br /></div>
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@@ Line 3,135: / Line 3,135: @@
 | align="center" | tools
 | align="center" |
-| align="center" | 3.2.2, 3.1.1
+| align="center" | 3.1.1, 3.2.2
 | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Xerces-C++ is a validating XML parser written in a portable subset of C++. Xerces-C++ makes it easy to give your application the ability to read and write XML data. A shared library is provided for parsing, generating, manipulating, and validating XML documents using the DOM, SAX, and SAX2 APIs. Homepage: http://xerces.apache.org/xerces-c/ URL: http://xerces.apache.org/xerces-c/ Keyword:tools<br /><br /></div>
 |-

Modules sse3: Difference between revisions

Modules sse3 (view source)

Revision as of 18:44, 17 June 2024