Translations:Biomolecular simulation/6/en: Difference between revisions

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* [http://www.plumed-code.org PLUMED], a library for code development related to the calculation of free energy in molecular dynamics simulations. See also [[GROMACS]].
* [http://www.plumed-code.org PLUMED], a library for code development related to the calculation of free energy in molecular dynamics simulations. See also [[GROMACS]].
* [https://www.rosettacommons.org Rosetta]
* [https://www.rosettacommons.org Rosetta]
* [[VMD]]

Revision as of 15:19, 30 July 2020

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Message definition (Biomolecular simulation)
* [[AMBER]]
* [[GROMACS]]
* [[NAMD]]
* [http://www.scd.stfc.ac.uk/SCD/44516.aspx DL_POLY]
* [http://glotzerlab.engin.umich.edu/hoomd-blue/ HOOMD-blue]
* [[LAMMPS]]
* [https://openkim.org/ OpenKIM], the Knowledgebase of Interatomic Models
* [[OpenMM]]
* [https://www.plumed.org PLUMED], a library for code development related to the calculation of free energy in molecular dynamics simulations. See also [[GROMACS]].
* [https://www.rosettacommons.org Rosetta]
* [https://swift.cmbi.umcn.nl/gv/dssp/ DSSP]
* [[VMD]]
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