User:Ppomorsk: Difference between revisions

Revision as of 15:46, 11 August 2017

Pawel Pomorski works for SHARCNET at the University of Waterloo.

For installation instructions, go to dedicated page: FEniCS

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 Pawel Pomorski works for SHARCNET at the University of Waterloo.
-==Fenics==
+==FEniCS==
-===Compile===
-{{File
+For installation instructions, go to dedicated page:  [[FEniCS]]
-  |name=fenics_install.sh
-  |lang="sh"
-  |contents=
-module load hdf5-mpi/1.8.18 boost eigen python/3 python35-scipy-stack/2017a petsc/3.7.5 fftw-mpi/3.3.6
-mkdir fenics && cd fenics
-git clone https://bitbucket.org/fenics-project/fiat.git
-git clone https://bitbucket.org/fenics-project/instant.git
-git clone https://bitbucket.org/fenics-project/dijitso.git
-git clone https://bitbucket.org/fenics-project/ufl.git
-git clone https://bitbucket.org/fenics-project/ffc.git
-git clone https://bitbucket.org/fenics-project/dolfin.git
-pyvenv ~/fenics
-source ~/fenics/bin/activate
-cd fiat    && pip3 install . && cd -
-cd instant && pip3 install . && cd -
-cd dijitso && pip3 install . && cd -
-cd ufl     && pip3 install . && cd -
-cd ffc     && pip3 install . && cd -
-pip3 install ply
-cd dolfin
-mkdir build && cd build && cmake .. -DDOLFIN_SKIP_BUILD_TESTS=true -DEIGEN3_INCLUDE_DIR=$EBROOTEIGEN/include  -DHDF5_ROOT=$EBROOTHDF5 -DCMAKE_INSTALL_PREFIX=$HOME/software/dolfin && nice make -j install && cd -
-}}
-===Run===
-{{File
-  |name=fenics_run.sh
-  |lang="sh"
-  |contents=
-module load hdf5-mpi/1.8.18 boost eigen python/3 python35-scipy-stack/2017a petsc/3.7.5 fftw-mpi/3.3.6
-source ~/software/dolfin/share/dolfin/dolfin.conf
-source ~/fenics/bin/activate
-}}