Visualization

External documentation for popular visualization packages

VMD

VMD is an open-source molecular visualization program for displaying, animating, and analyzing large biomolecular systems in 3D. It supports scripting in Tcl and Python and runs on a wide variety of platforms (MacOS X, Linux, Windows). It reads a large variety of molecular data formats using an extensible plugin system and supports a number of different molecular representations.

• VMD User's Guide

Visualization gallery

You can find a gallery of visualizations based on models run on Compute Canada systems in the visualization gallery.