Modules avx512: Difference between revisions

| align="center" | 3.8, 3.9, 3.12, 3.14, 3.16

| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Bioconductor provides tools for the analysis and coprehension of high-throughput genomic data. Homepage: https://bioconductor.org URL: https://bioconductor.org Extensions: abind-1.4-5, ade4-1.7-20, admisc-0.30, affxparser-1.70.0, affy-1.76.0, affycoretools-1.70.0, affyio-1.68.0, AgiMicroRna-2.48.0, ALDEx2-1.30.0, ALL-1.40.0, annaffy-1.70.0, annotate-1.76.0, AnnotationDbi-1.60.0, AnnotationFilter-1.22.0, AnnotationForge-1.40.0, AnnotationHub-3.6.0, anytime-0.3.9, aod-1.3.2, ape-5.6-2, aroma.affymetrix-3.2.1, aroma.apd-0.6.1, aroma.core-3.3.0, aroma.light-3.28.0, ash-1.0-15, askpass-1.1, assertthat-0.2.1, ATACseqQC-1.22.0, aws-2.5-1, aws.s3-0.3.21, aws.signature-0.6.0, awsMethods-1.1-1, backports-1.4.1, ballgown-2.30.0, base64-2.0.1, base64enc-0.1-3, batchelor-1.14.0, baySeq-2.31.0, beachmat-2.14.0, beanplot-1.3.1, beeswarm-0.4.0, BH-1.78.0-0, BiasedUrn-2.0.8, Biobase-2.58.0, BiocFileCache-2.6.0, BiocGenerics-0.44.0, BiocIO-1.8.0, BiocManager-1.30.19, BiocNeighbors-1.16.0, BiocParallel-1.32.3, BiocSingular-1.14.0, BiocVersion-3.16.0, biomaRt-2.54.0, biomformat-1.26.0, Biostrings-2.66.0, biovizBase-1.46.0, bit-4.0.5, bit64-4.0.5, bitops-1.0-7, blme-1.0-5, blob-1.2.3, bluster-1.8.0, boot-1.3-28.1, brio-1.1.3, broom-1.0.1, BSgenome-1.66.1, BSgenome.Cfamiliaris.UCSC.canFam3-1.4.0, BSgenome.Hsapiens.UCSC.hg19-1.4.3, BSgenome.Hsapiens.UCSC.hg38-1.4.4, BSgenome.Mmusculus.UCSC.mm10-1.4.3, bslib-0.4.1, bumphunter-1.40.0, cachem-1.0.6, Cairo-1.6-0, callr-3.7.3, CAMERA-1.54.0, car-3.1-1, carData-3.0-5, caret-6.0-93, Category-2.64.0, caTools-1.18.2, ccdata-1.24.0, ccmap-1.24.0, cellranger-1.1.0, CGHbase-1.58.0, checkmate-2.1.0, ChIPpeakAnno-3.32.0, circlize-0.4.15, class-7.3-20, cli-3.4.1, clipr-0.8.0, clock-0.6.1, clue-0.3-63, cluster-2.1.4, CNEr-1.34.0, coda-0.19-4, codetools-0.2-18, colorRamps-2.3.1, colorspace-2.0-3, colourpicker-1.2.0, commonmark-1.8.1, ComplexHeatmap-2.14.0, conquer-1.3.1, ConsensusClusterPlus-1.62.0, conumee-1.32.0, corpcor-1.6.10, corrplot-0.92, cowplot-1.1.1, cpp11-0.4.3, crayon-1.5.2, crossmeta-1.24.0, crosstalk-1.2.0, cummeRbund-2.40.0, curl-4.3.3, cytolib-2.10.0, CytoML-2.10.0, dada2-1.26.0, data.table-1.14.6, DBI-1.1.3, dbplyr-2.2.1, DeconRNASeq-1.40.0, DEGseq-1.52.0, DelayedArray-0.24.0, DelayedMatrixStats-1.20.0, deldir-1.0-6, dendextend-1.16.0, DEoptimR-1.0-11, derfinder-1.32.0, derfinderHelper-1.32.0, desc-1.4.2, DESeq2-1.38.1, deSolve-1.34, dichromat-2.0-0.1, diffcyt-1.18.0, diffobj-0.3.5, digest-0.6.30, diptest-0.76-0, DirichletMultinomial-1.40.0, DNAcopy-1.72.1, doParallel-1.0.17, doRNG-1.8.2, dplyr-1.0.10, dqrng-0.3.0, DRIMSeq-1.26.0, DropletUtils-1.18.1, DT-0.26, dupRadar-1.28.0, DynDoc-1.76.0, e1071-1.7-12, EBImage-4.40.0, edgeR-3.40.0, ellipse-0.4.3, ellipsis-0.3.2, ensembldb-2.22.0, evaluate-0.18, ExperimentHub-2.6.0, fansi-1.0.3, farver-2.1.1, fastcluster-1.2.3, fastICA-1.2-3, fastmap-1.1.0, fastmatch-1.1-3, fda-6.0.5, FDb.InfiniumMethylation.hg19-2.2.0, fdrtool-1.2.17, fds-1.8, ff-4.0.7, fftwtools-0.9-11, fgsea-1.24.0, filelock-1.0.2, fitdistrplus-1.1-8, flexmix-2.3-18, flowClust-3.36.0, flowCore-2.10.0, FlowSOM-2.6.0, FlowSorted.Blood.EPIC-2.2.0, FlowSorted.CordBloodCombined.450k-1.14.0, flowStats-4.10.0, flowViz-1.62.0, flowWorkspace-4.10.0, FNN-1.1.3.1, fontawesome-0.4.0, forcats-0.5.2, foreach-1.5.2, foreign-0.8-83, formatR-1.12, Formula-1.2-4, formula.tools-1.7.1, fpc-2.2-9, fresh-0.2.0, fs-1.5.2, futile.logger-1.4.3, futile.options-1.0.1, future-1.29.0, future.apply-1.10.0, gbm-2.1.8.1, gbRd-0.4-11, gcrma-2.70.0, gdata-2.18.0.1, gdsfmt-1.34.0, genefilter-1.80.1, geneLenDataBase-1.34.0, geneplotter-1.76.0, generics-0.1.3, GENESIS-2.28.0, GENIE3-1.20.0, GenomeInfoDb-1.34.3, GenomeInfoDbData-1.2.9, GenomicAlignments-1.34.0, GenomicFeatures-1.50.2, GenomicFiles-1.34.0, GenomicRanges-1.50.1, GenomicScores-2.10.0, GEOquery-2.66.0, GetoptLong-1.0.5, GGally-2.1.2, ggbeeswarm-0.6.0, ggbio-1.46.0, ggcyto-1.26.0, ggforce-0.4.1, ggnewscale-0.4.8, ggplot2-3.4.0, ggpointdensity-0.1.0, ggpubr-0.5.0, ggrastr-1.0.1, ggrepel-0.9.2, ggridges-0.5.4, ggsci-2.9, ggsignif-0.6.4, ggvis-0.4.7, GLAD-2.62.0, Glimma-2.8.0, glmmTMB-1.1.5, glmnet-4.1-6, GlobalAncova-4.16.0, GlobalOptions-0.1.2, globals-0.16.2, globaltest-5.52.0, glue-1.6.2, GO.db-3.16.0, goftest-1.2-3, goseq-1.50.0, GOstats-2.64.0, gower-1.0.0, gplots-3.1.3, graph-1.76.0, gridExtra-2.3, GSA-1.03.2, GSEABase-1.60.0, gsl-2.1-7.1, gsmoothr-0.1.7, GSVA-1.46.0, gtable-0.3.1, gtools-3.9.4, Gviz-1.42.0, GWASExactHW-1.01, GWASTools-1.44.0, hardhat-1.2.0, HDF5Array-1.26.0, hdrcde-3.4, here-1.0.1, hexbin-1.28.2, hgu133plus2.db-3.13.0, highr-0.9, Hmisc-4.7-2, HMMcopy-1.40.0, hms-1.1.2, Homo.sapiens-1.3.1, htmlTable-2.4.1, htmltools-0.5.3, htmlwidgets-1.5.4, httpuv-1.6.6, httr-1.4.4, hwriter-1.3.2.1, ica-1.0-3, IDPmisc-1.1.20, igraph-1.3.5, IHW-1.26.0, IlluminaHumanMethylation450kanno.ilmn12.hg19-0.6.1, IlluminaHumanMethylation450kmanifest-0.4.0, IlluminaHumanMethylationEPICanno.ilm10b2.hg19-0.6.0, IlluminaHumanMethylationEPICanno.ilm10b4.hg19-0.6.0, IlluminaHumanMethylationEPICmanifest-0.3.0, illuminaio-0.40.0, impute-1.72.1, InteractionSet-1.26.0, interactiveDisplayBase-1.36.0, interp-1.1-3, ipred-0.9-13, IRanges-2.32.0, irlba-2.3.5.1, isoband-0.2.6, isva-1.9, iterators-1.0.14, JADE-2.0-3, jpeg-0.1-10, jquerylib-0.1.4, jsonlite-1.8.3, KEGG.db-3.2.4, KEGGgraph-1.58.0, KEGGREST-1.38.0, kernlab-0.9-31, KernSmooth-2.23-20, knitr-1.41, ks-1.14.0, labeling-0.4.2, lambda.r-1.2.4, LaplacesDemon-16.1.6, later-1.3.0, lattice-0.20-45, latticeExtra-0.6-30, lava-1.7.0, lazyeval-0.2.2, LEA-3.10.0, leiden-0.4.3, lifecycle-1.0.3, limma-3.54.0, limSolve-1.5.6, listenv-0.8.0, lme4-1.1-31, lmerTest-3.1-3, lmtest-0.9-40, locfit-1.5-9.6, logistf-1.24.1, logspline-2.1.19, lpSolve-5.6.17, lpsymphony-1.26.0, lsa-0.73.3, lubridate-1.9.0, lumi-2.50.0, magrittr-2.0.3, MALDIquant-1.22, maptools-1.1-5, markdown-1.4, marray-1.76.0, maSigPro-1.70.0, MASS-7.3-58.1, MassSpecWavelet-1.64.0, mathjaxr-1.6-0, Matrix-1.5-3, MatrixGenerics-1.10.0, MatrixModels-0.5-1, matrixStats-0.63.0, mclust-6.0.0, MEDIPS-1.50.0, memoise-2.0.1, metagenomeSeq-1.40.0, metaMA-3.1.3, metap-1.8, metapod-1.6.0, MethylSeekR-1.38.0, methylumi-2.44.0, Mfuzz-2.58.0, mgcv-1.8-41, mhsmm-0.4.16, mice-3.15.0, mime-0.12, minfi-1.44.0, miniUI-0.1.1.1, minqa-1.2.5, misc3d-0.9-1, missMethyl-1.32.0, mixOmics-6.22.0, mixtools-1.2.0, mlbench-2.1-3, MLInterfaces-1.78.0, mnormt-2.1.1, ModelMetrics-1.2.2.2, modeltools-0.2-23, MotifDb-1.40.0, motifStack-1.42.0, MsCoreUtils-1.10.0, MsFeatures-1.6.0, MSnbase-2.24.0, multcomp-1.4-20, multicool-0.1-12, multtest-2.54.0, munsell-0.5.0, muscat-1.12.0, mutoss-0.1-12, mvtnorm-1.1-3, mzID-1.36.0, mzR-2.32.0, NADA-1.6-1.1, ncdf4-1.19, ncdfFlow-2.44.0, NCmisc-1.2.0, nleqslv-3.3.3, nlme-3.1-160, nloptr-2.0.3, nnet-7.3-18, NOISeq-2.42.0, nor1mix-1.3-0, numDeriv-2016.8-1.1, oligo-1.62.0, oligoClasses-1.60.0, openCyto-2.10.0, openssl-2.0.4, openxlsx-4.2.5.1, operator.tools-1.6.3, org.Hs.eg.db-3.16.0, org.Mm.eg.db-3.16.0, org.Rn.eg.db-3.16.0, OrganismDbi-1.40.0, parallelly-1.32.1, patchwork-1.1.2, pbapply-1.6-0, pbkrtest-0.5.1, pcaMethods-1.90.0, pcaPP-2.0-3, penalized-0.9-52, perm-1.0-0.2, permute-0.9-7, PFAM.db-3.16.0, pheatmap-1.0.12, phyloseq-1.42.0, pillar-1.8.1, pixmap-0.4-12, pkgbuild-1.4.0, pkgconfig-2.0.3, pkgload-1.3.2, plogr-0.2.0, plot3D-1.4, plotly-4.10.1, plotrix-3.8-2, pls-2.8-1, plyr-1.8.8, png-0.1-8, polyclip-1.10-4, polyester-1.34.0, polynom-1.4-1, poweRlaw-0.70.6, prabclus-2.3-2, pracma-2.4.2, praise-1.0.0, preprocessCore-1.60.0, preseqR-4.0.0, prettyunits-1.1.1, pROC-1.18.0, processx-3.8.0, prodlim-2019.11.13, proftools-0.99-3, progress-1.2.2, progressr-0.11.0, pRoloc-1.38.0, pRolocdata-1.36.0, pRolocGUI-2.8.0, promises-1.2.0.1, ProtGenerics-1.30.0, proxy-0.4-27, ps-1.7.2, PSCBS-0.66.0, PureCN-2.4.0, purrr-0.3.5, qqconf-1.3.0, quadprog-1.5-8, quantreg-5.94, quantsmooth-1.64.0, qvalue-2.30.0, R.cache-0.16.0, R.devices-2.17.1, R.filesets-2.15.0, R.huge-0.9.0, R.methodsS3-1.8.2, R.oo-1.25.0, R.rsp-0.45.0, R.utils-2.12.2, R6-2.5.1, ragg-1.2.4, rainbow-3.7, randomcoloR-1.1.0.1, randomForest-4.7-1.1, RANN-2.6.1, rappdirs-0.3.3, rARPACK-0.11-0, RBGL-1.74.0, rbibutils-2.2.10, RColorBrewer-1.1-3, Rcpp-1.0.9, RcppAnnoy-0.0.20, RcppArmadillo-0.11.4.2.1, RcppEigen-0.3.3.9.3, RcppGSL-0.3.12, RcppHNSW-0.4.1, RcppML-0.3.7, RcppParallel-5.1.5, RcppProgress-0.4.2, RcppTOML-0.1.7, RcppZiggurat-0.1.6, RCurl-1.98-1.9, Rdpack-2.4, reader-1.0.6, readr-2.1.3, readxl-1.4.1, recipes-1.0.3, regioneR-1.30.0, rematch-1.0.1, rematch2-2.1.2, Repitools-1.44.0, ReportingTools-2.38.0, reshape-0.8.9, reshape2-1.4.4, ResidualMatrix-1.8.0, restfulr-0.0.15, reticulate-1.26, Rfast-2.0.6, rGADEM-2.46.0, Rgraphviz-2.42.0, rhdf5-2.42.0, rhdf5filters-1.10.0, Rhdf5lib-1.20.0, RhpcBLASctl-0.21-247.1, Rhtslib-2.0.0, Ringo-1.62.0, rjson-0.2.21, rlang-1.0.6, RNASeqPower-1.38.0, rngtools-1.5.2, robustbase-0.95-0, ROC-1.74.0, ROCR-1.0-11, rpart-4.1.19, rprojroot-2.0.3, RProtoBufLib-2.10.0, rrcov-1.7-2, Rsamtools-2.14.0, Rsolnp-1.16, RSpectra-0.16-1, RSQLite-2.2.19, rstatix-0.7.1, rstudioapi-0.14, Rsubread-2.12.0, rsvd-1.0.5, rtracklayer-1.58.0, Rtsne-0.16, RUnit-0.4.32, ruv-0.9.7.1, S4Vectors-0.36.0, sampling-2.9, samr-3.0, sandwich-3.0-2, sass-0.4.4, SC3-1.26.0, ScaledMatrix-1.6.0, scales-1.2.1, scater-1.26.1, scattermore-0.8, scran-1.26.0, scrime-1.3.5, sctransform-0.3.5, scuttle-1.8.1, segmented-1.6-1, SeqArray-1.38.0, seqLogo-1.64.0, SeqVarTools-1.36.0, Seurat-4.3.0, SeuratObject-4.1.3, sfsmisc-1.1-14, shape-1.4.6, shiny-1.7.3, shinyBS-0.61.1, shinydashboard-0.7.2, shinydashboardPlus-2.0.3, shinyFiles-0.9.3, shinyhelper-0.3.2, shinyjs-2.1.0, shinypanel-0.1.5, shinyWidgets-0.7.5, ShortRead-1.56.1, siggenes-1.72.0, SingleCellExperiment-1.20.0, SingleR-2.0.0, sitmo-2.0.2, slam-0.1-50, SMVar-1.3.4, sn-2.1.0, snow-0.4-4, SnowballC-0.7.0, snowfall-1.84-6.2, SNPRelate-1.32.0, sourcetools-0.1.7, sp-1.5-1, SparseM-1.81, sparseMatrixStats-1.10.0, spatstat-3.0-2, spatstat.core-2.4-4, spatstat.data-3.0-0, spatstat.explore-3.0-5, spatstat.geom-3.0-3, spatstat.linnet-3.0-3, spatstat.model-3.0-2, spatstat.random-3.0-1, spatstat.sparse-3.0-0, spatstat.utils-3.0-1, SPIA-2.50.0, splitstackshape-1.4.8, SQUAREM-2021.1, stageR-1.20.0, statmod-1.4.37, stringi-1.7.8, stringr-1.4.1, SummarizedExperiment-1.28.0, survival-3.4-0, sva-3.46.0, sys-3.4.1, systemfonts-1.0.4, TeachingDemos-2.12, tensor-1.5, testthat-3.1.5, textshaping-0.3.6, TFBSTools-1.36.0, TFisher-0.2.0, TFMPvalue-0.0.9, TH.data-1.1-1, threejs-0.3.3, tibble-3.1.8, tidyr-1.2.1, tidyselect-1.2.0, tiff-0.1-11, timechange-0.1.1, timeDate-4021.106, tkWidgets-1.76.0, TMB-1.9.1, tmvnsim-1.0-2, truncnorm-1.0-8, tsne-0.1-3.1, tweenr-2.0.2, TxDb.Hsapiens.UCSC.hg19.knownGene-3.2.2, TxDb.Mmusculus.UCSC.mm10.knownGene-3.10.0, tximport-1.26.0, tzdb-0.3.0, utf8-1.2.2, uwot-0.1.14, V8-4.2.2, variancePartition-1.28.0, VariantAnnotation-1.44.0, vctrs-0.5.1, vegan-2.6-4, venn-1.11, VennDiagram-1.7.3, VGAM-1.1-7, vipor-0.4.5, viridis-0.6.2, viridisLite-0.4.1, vroom-1.6.0, vsn-3.66.0, waiter-0.2.5, waldo-0.4.0, wateRmelon-2.4.0, waveslim-1.8.4, widgetTools-1.76.0, withr-2.5.0, Wrench-1.16.0, WriteXLS-6.4.0, xcms-3.20.0, xfun-0.35, xgboost-1.6.0.1, XML-3.99-0.12, xml2-1.3.3, xtable-1.8-4, XVector-0.38.0, yaml-2.3.6, zCompositions-1.4.0-1, zip-2.2.2, zlibbioc-1.44.0, zoo-1.8-11 Keyword:bio<br /><br /><br /></div>

| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: xtb - Extended tight-binding semi-empirical quantum mechanics Homepage: https://github.com/grimme-lab/xtb URL: https://github.com/grimme-lab/xtb Compatible modules: python/3.8, python/3.9, python/3.10 Extensions: ase-3.22.1, Pint-0.19.2, pydantic-1.9.1, qcelemental-0.24.0, xtb-6.5.1 Keyword:chem<br /><br /><br /></div>