GATK: Difference between revisions

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On all of our clusters (Graham, Cedar, Beluga), we provide
On all of our clusters (Graham, Cedar, Beluga), we provide
different versions of GATK. To access the version information you can use
different versions of GATK. To access the version information you can use
the [https://docs.computecanada.ca/wiki/Utiliser_des_modules/en <code>module</code> command]:
the [https://docs.computecanada.ca/wiki/Utiliser_des_modules/en <code>module</code> command]


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which will give you some information about GATK and the versions:
which gives you some information about GATK and versions
<pre>
<pre>
gatk/3.7
gatk/3.7
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More specific information of any given version can be accessed with:
More specific information of any given version can be accessed with


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As you can see, this module only has the nixpkgs/16.09 module as prerequisite
As you can see, this module only has the nixpkgs/16.09 module as prerequisite
so it can be loaded by:
so it can be loaded with


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Or, given that nixpkgs/16.09 is loaded by default, simply:
or, given that nixpkgs/16.09 is loaded by default, simply with


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