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GATK: Difference between revisions
→Running GATK via singularity
(GATK via singularity) |
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A docker image can be found [https://hub.docker.com/r/broadinstitute/gatk here]. There are different versions to explore at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to [[Singularity/en#Creating_an_image_using_Docker_Hub|build singularity image from docker]]. | A docker image can be found [https://hub.docker.com/r/broadinstitute/gatk here]. There are different versions to explore at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to [[Singularity/en#Creating_an_image_using_Docker_Hub|build singularity image from docker]]. | ||
For example, | For example, one could run on the cluster: | ||
<code> | <code> | ||