GATK: Difference between revisions

2 bytes removed ,  1 year ago
no edit summary
No edit summary
No edit summary
Line 135: Line 135:
A Docker image of GATK can be found [https://hub.docker.com/r/broadinstitute/gatk here] and other versions are available at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to build an Apptainer image from the Docker image,  
A Docker image of GATK can be found [https://hub.docker.com/r/broadinstitute/gatk here] and other versions are available at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to build an Apptainer image from the Docker image,  
for example to get the latest version, you can run the following commands on the cluster:
for example to get the latest version, you can run the following commands on the cluster:


<!--T:40-->
<!--T:40-->
Bureaucrats, cc_docs_admin, cc_staff
2,306

edits