GATK: Difference between revisions

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A Docker image of GATK can be found [https://hub.docker.com/r/broadinstitute/gatk here] and other versions are available at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to build an Apptainer image from the Docker image,  
A Docker image of GATK can be found [https://hub.docker.com/r/broadinstitute/gatk here] and other versions are available at this [https://hub.docker.com/r/broadinstitute/gatk/tags page]. You will need first to build an Apptainer image from the Docker image,  
for example to get the latest version, you can run the following commands on the cluster:
for example to get the latest version, you can run the following commands on the cluster:


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