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Apptainer: Difference between revisions
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* <code>workdir</code> can be removed if there are no live containers using it. | * <code>workdir</code> can be removed if there are no live containers using it. | ||
* When using Apptainer in an <code>salloc</code>, in an <code>sbatch</code> job, or when using [JupyterHub] on our clusters, use <code>${SLURM_TMPDIR}</code> for the working directory's location, e.g., <code>-W ${SLURM_TMPDIR}</code>. | * When using Apptainer in an <code>salloc</code>, in an <code>sbatch</code> job, or when using [[JupyterHub]] on our clusters, use <code>${SLURM_TMPDIR}</code> for the working directory's location, e.g., <code>-W ${SLURM_TMPDIR}</code>. | ||
** ASIDE: One should <b>not</b> be running programs (including Apptainer) on a login node. Use an interactive <code>salloc</code> job. | ** ASIDE: One should <b>not</b> be running programs (including Apptainer) on a login node. Use an interactive <code>salloc</code> job. | ||
* When using bind mounts, see the [[#Bind_Mounts|section on bind mounts]] below since not all of our clusters are the same concerning the exact bind mounts needed to access <code>/home</code>, <code>/project</code>, and <code>/scratch</code>. | * When using bind mounts, see the [[#Bind_Mounts|section on bind mounts]] below since not all of our clusters are the same concerning the exact bind mounts needed to access <code>/home</code>, <code>/project</code>, and <code>/scratch</code>. | ||