FreeSurfer: Difference between revisions

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==Installation in a shared folder== <!--T:12-->
==Installation in a shared folder== <!--T:12-->
Using EasyBuild, it is possible to install the program in a shared location (like /project) and make the code available for any other member of the group. The following will install freesurfer under the project <code>def-someuser</code> under the directory <code>/home/$USER/projects/def-someuser/$USER/software</code> and the module under the user's directory <code>/home/$USER/.local/easybuild/modules/2017/Core/freesurfer</code>.  
Using EasyBuild, it is possible to install the program in a shared location (like /project) and make the code available for any other member of the group. The following will install FreeSurfer under the directory <code>/home/$USER/projects/def-someuser/$USER/software</code> and the module under the user's directory <code>/home/$USER/.local/easybuild/modules/2017/Core/freesurfer</code>.  




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* You need to give all members of your group read and exec access to the installation directory <code>/home/$USER/projects/def-someuser/$USER</code>. To see how to give them access to this directory, please read [[Sharing_data#Changing_the_permissions_of_existing_files|Changing the permissions of existing files]].
* You need to give all members of your group read and exec access to the installation directory <code>/home/$USER/projects/def-someuser/$USER</code>. To see how to give them access to this directory, please read [[Sharing_data#Changing_the_permissions_of_existing_files|Changing the permissions of existing files]].
* Each member of the group will need to put the module file in their own home directories. The module file <code>6.0.1.lua</code> is located under the directory:  
* Each member of the group will need to put the module file in their own /home directories. The module file <code>6.0.1.lua</code> is located under the directory:  
<pre>
<pre>
/home/$USER/.local/easybuild/modules/2017/Core/freesurfer/</code>
/home/$USER/.local/easybuild/modules/2017/Core/freesurfer/</code>
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