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GATK: Difference between revisions
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The | The [https://bio.tools/gatk Genome Analysis Toolkit (GATK)] is a set of bioinformatic tools for | ||
analyzing high-throughput sequencing (HTS) and variant call format (VCF) | analyzing high-throughput sequencing (HTS) and variant call format (VCF) | ||
data. The toolkit is well established for germline short variant | data. The toolkit is well established for germline short variant | ||
discovery from whole genome and exome sequencing data | discovery from whole genome and exome sequencing data. | ||
It is a leading tool in variant discovery and [https://gatk.broadinstitute.org/hc/en-us/sections/360007226651-Best-Practices-Workflows best practices] | It is a leading tool in variant discovery and [https://gatk.broadinstitute.org/hc/en-us/sections/360007226651-Best-Practices-Workflows best practices] | ||
for genomics research. | for genomics research. | ||