Bureaucrats, cc_docs_admin, cc_staff
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MetaPhlAn: Difference between revisions
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→Initialization
| Line 29: | Line 29: | ||
module load gcc blast samtools bedtools bowtie2 python/3.9 | module load gcc blast samtools bedtools bowtie2 python/3.9 | ||
cd $HOME | cd $HOME | ||
pbunzip2 -p4 mpa_v31_CHOCOPhlAn_201901.fna.bz2 | |||
source ENV/bin/activate | source ENV/bin/activate | ||
metaphlan --install --index mpa_v31_CHOCOPhlAn_201901 --bowtie2db $PWD | metaphlan --install --index mpa_v31_CHOCOPhlAn_201901 --bowtie2db $PWD | ||
}} | }} | ||