Bioinformatics/en: Difference between revisions

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=Data=
=Data=


Some genome databases are available on our clusters, in <code>/cvmfs/ref.mugqic/genomes</code>.
Some genome databases are available on our clusters, provided by [https://genpipes.readthedocs.io/en/latest/c3gres/cvmfs_genomes.html MUGQIC].
Examine that directory and its subdirectories, e.g. with
 
{{Command|ls /cvmfs/ref.mugqic/genomes}}
 
or
 
{{Command|ls /cvmfs/ref.mugqic/genomes/species}}
 
=Container repository=
The Bioinformatics National Team maintains a repository of Apptainer (formerly Singularity) containers which provide common workflows and those workflows requiring preservation. Learn more at [[Biorepo Containers]].
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