Modules avx512: Difference between revisions

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| align="center" | 10.7.3, 11.1.0
| align="center" | 10.7.3, 11.1.0
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Datasets for Geant4. Homepage: https://geant4.cern.ch/ URL: https://geant4.cern.ch/<br /><br /><br /></div>
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Datasets for Geant4. Homepage: https://geant4.cern.ch/ URL: https://geant4.cern.ch/<br /><br /><br /></div>
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| align="center" | [http://geant4.cern.ch/ geant4-seq]
| align="center" | -
| align="center" | 11.1.0
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Geant4 is a toolkit for the simulation of the passage of particles through matter. Its areas of application include high energy, nuclear and accelerator physics, as well as studies in medical and space science. Homepage: http://geant4.cern.ch/ URL: http://geant4.cern.ch/<br /><br /><br /></div>
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| align="center" | [http://veda.cs.uiuc.edu/Seq2Expr/ gemma]
| align="center" | [http://veda.cs.uiuc.edu/Seq2Expr/ gemma]
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Strelka2 is a fast and accurate small variant caller optimized for analysis of germline variation in small cohorts and somatic variation in tumor/normal sample pairs. Homepage: https://github.com/Illumina/strelka URL: https://github.com/Illumina/strelka<br /><br /><br /></div>
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Strelka2 is a fast and accurate small variant caller optimized for analysis of germline variation in small cohorts and somatic variation in tumor/normal sample pairs. Homepage: https://github.com/Illumina/strelka URL: https://github.com/Illumina/strelka<br /><br /><br /></div>
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| align="center" | [https://ccb.jhu.edu/software/stringtie/ stringtie]
| align="center" | [http://ccb.jhu.edu/software/stringtie/ stringtie]
| align="center" | bio
| align="center" | bio
| align="center" | 1.3.4d, 2.0, 2.1.0, 2.1.3, 2.1.5
| align="center" | 1.3.4d, 2.0, 2.1.0, 2.1.3, 2.1.5
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts Homepage: https://ccb.jhu.edu/software/stringtie/ URL: https://ccb.jhu.edu/software/stringtie/ Keyword:bio<br /><br /><br /></div>
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. Homepage: http://ccb.jhu.edu/software/stringtie/ URL: http://ccb.jhu.edu/software/stringtie/ Keyword:bio<br /><br /><br /></div>
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| align="center" | [http://web.stanford.edu/group/pritchardlab/software/ structure]
| align="center" | [http://web.stanford.edu/group/pritchardlab/software/ structure]
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| align="center" | bio
| align="center" | bio
| align="center" | 3.0.2, 3.2.0, 3.2.1, 3.2.2, 4.0.0
| align="center" | 3.0.2, 3.2.0, 3.2.1, 3.2.2, 4.0.0
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms. Homepage: https://trinotate.github.io/ URL: https://trinotate.github.io/ Extensions: CGI-4.57, Text::NSP-1.31 Keyword:bio<br /><br /><br /></div>
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Trinotate is a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms. Homepage: https://trinotate.github.io/ URL: https://trinotate.github.io/ Extensions: CGI-4.51, Text::NSP-1.31 Keyword:bio<br /><br /><br /></div>
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| align="center" | [https://triqs.github.io/triqs triqs]
| align="center" | [https://triqs.github.io/triqs triqs]

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