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Updated machine files and new batch file
(A better reference for XML configuration) |
(Updated machine files and new batch file) |
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| Line 37: | Line 37: | ||
<MAX_MPITASKS_PER_NODE>40</MAX_MPITASKS_PER_NODE> | <MAX_MPITASKS_PER_NODE>40</MAX_MPITASKS_PER_NODE> | ||
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | <PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | ||
<mpirun mpilib="default"> | |||
<executable>srun</executable> | |||
</mpirun> | |||
</machine> | </machine> | ||
<default_run_suffix> | |||
<default_run_exe>${EXEROOT}/cesm.exe </default_run_exe> | |||
<default_run_misc_suffix> >> cesm.log.$LID 2>&1 </default_run_misc_suffix> | |||
</default_run_suffix> | |||
</config_machines> | </config_machines> | ||
}} | }} | ||
| Line 70: | Line 79: | ||
<MAX_MPITASKS_PER_NODE>48</MAX_MPITASKS_PER_NODE> | <MAX_MPITASKS_PER_NODE>48</MAX_MPITASKS_PER_NODE> | ||
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | <PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | ||
<mpirun mpilib="default"> | |||
<executable>srun</executable> | |||
</mpirun> | |||
</machine> | </machine> | ||
<default_run_suffix> | |||
<default_run_exe>${EXEROOT}/cesm.exe </default_run_exe> | |||
<default_run_misc_suffix> >> cesm.log.$LID 2>&1 </default_run_misc_suffix> | |||
</default_run_suffix> | |||
</config_machines> | </config_machines> | ||
}} | }} | ||
| Line 103: | Line 121: | ||
<MAX_MPITASKS_PER_NODE>44</MAX_MPITASKS_PER_NODE> | <MAX_MPITASKS_PER_NODE>44</MAX_MPITASKS_PER_NODE> | ||
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | <PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | ||
<mpirun mpilib="default"> | |||
<executable>srun</executable> | |||
</mpirun> | |||
</machine> | </machine> | ||
<default_run_suffix> | |||
<default_run_exe>${EXEROOT}/cesm.exe </default_run_exe> | |||
<default_run_misc_suffix> >> cesm.log.$LID 2>&1 </default_run_misc_suffix> | |||
</default_run_suffix> | |||
</config_machines> | </config_machines> | ||
}} | }} | ||
| Line 136: | Line 163: | ||
<MAX_MPITASKS_PER_NODE>64</MAX_MPITASKS_PER_NODE> | <MAX_MPITASKS_PER_NODE>64</MAX_MPITASKS_PER_NODE> | ||
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | <PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | ||
<mpirun mpilib="default"> | |||
<executable>srun</executable> | |||
</mpirun> | |||
</machine> | </machine> | ||
<default_run_suffix> | |||
<default_run_exe>${EXEROOT}/cesm.exe </default_run_exe> | |||
<default_run_misc_suffix> >> cesm.log.$LID 2>&1 </default_run_misc_suffix> | |||
</default_run_suffix> | |||
</config_machines> | </config_machines> | ||
}} | }} | ||
| Line 169: | Line 205: | ||
<MAX_MPITASKS_PER_NODE>40</MAX_MPITASKS_PER_NODE> | <MAX_MPITASKS_PER_NODE>40</MAX_MPITASKS_PER_NODE> | ||
<PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | <PROJECT_REQUIRED>TRUE</PROJECT_REQUIRED> | ||
<mpirun mpilib="default"> | |||
<executable>srun</executable> | |||
</mpirun> | |||
</machine> | </machine> | ||
<default_run_suffix> | |||
<default_run_exe>${EXEROOT}/cesm.exe </default_run_exe> | |||
<default_run_misc_suffix> >> cesm.log.$LID 2>&1 </default_run_misc_suffix> | |||
</default_run_suffix> | |||
</config_machines> | </config_machines> | ||
}} | }} | ||
| Line 192: | Line 237: | ||
}} | }} | ||
</li> | </li> | ||
</ul> | |||
==Local batch file== | |||
<ul> | |||
<li>Create and edit the file <code>~/.cime/config_batch.xml</code> from the following minimal content: | |||
{{File | |||
|name=~/.cime/config_batch.xml | |||
|lang="xml" | |||
|contents= | |||
<?xml version="1.0"?> | |||
<config_batch version="2.1"> | |||
<batch_system type="slurm"> | |||
<batch_submit>sbatch</batch_submit> | |||
<submit_args> | |||
<arg flag="--time" name="$JOB_WALLCLOCK_TIME"/> | |||
<arg flag="--account" name="$PROJECT"/> | |||
</submit_args> | |||
<directives> | |||
<directive>--mem=0</directive> | |||
</directives> | |||
<queues> | |||
<queue default="true">default</queue> | |||
</queues> | |||
</batch_system> | |||
</config_batch> | |||
}} | |||
</li> | |||
<li>Validate your XML machine file with the following commands: | |||
{{Command2 | |||
|prompt=[name@server ~]$|module load cesm/2.1.3 && xmllint --noout --schema $EBROOTCESM/cime/config/xml_schemas/config_batch.xsd ~/.cime/config_batch.xml | |||
|result= | |||
/home/username/.cime/config_batch.xml validates | |||
}} | |||
</li> | |||
<li>Check the documentation for additional <b>[https://esmci.github.io/cime/versions/maint-5.6/html/xml_files/cesm.html#cimeroot-config-cesm-machines configuration parameters and examples]</b>.</li> | |||
</ul> | </ul> | ||