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| align="center" | [https://www.openfoam.org/ openfoam] | | align="center" | [https://www.openfoam.org/ openfoam] | ||
| align="center" | phys | | align="center" | phys | ||
| align="center" | v1812, v1906, v1912, v2012, 2.2.2, 2.3.1, 2.4.0, 3.0.1, 4.1, 5.0, 6.20180813, 7 | | align="center" | v1812, v1906, v1912, v2012, 2.2.2, 2.3.1, 2.4.0, 3.0.1, 4.1, 5.0, 6, 6.20180813, 7 | ||
| Documentation: [[OpenFOAM]]<div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. Homepage: https://www.openfoam.org/ URL: https://www.openfoam.org/ Keyword:phys<br /><br /><br /></div> | | Documentation: [[OpenFOAM]]<div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenFOAM is a free, open source CFD software package. OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. Homepage: https://www.openfoam.org/ URL: https://www.openfoam.org/ Keyword:phys<br /><br /><br /></div> | ||
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| align="center" | 1.1.alpha19 | | align="center" | 1.1.alpha19 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis. Homepage: http://matsen.fhcrc.org/pplacer/ URL: http://matsen.fhcrc.org/pplacer/ Keyword:bio<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment. Pplacer is designed to be fast, to give useful information about uncertainty, and to offer advanced visualization and downstream analysis. Homepage: http://matsen.fhcrc.org/pplacer/ URL: http://matsen.fhcrc.org/pplacer/ Keyword:bio<br /><br /><br /></div> | ||
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| align="center" | [http://www.cs.wm.edu/~andreas/software/ primme] | |||
| align="center" | - | |||
| align="center" | 3.2 | |||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: PRIMME, pronounced as prime, is a high-performance library for computing a few eigenvalues/eigenvectors, and singular values/vectors. PRIMME is especially optimized for large, difficult problems. Real symmetric and complex Hermitian problems, standard A x = \lambda x and generalized A x = \lambda B x, are supported. Besides, standard eigenvalue problems with a normal matrix are supported. It can find largest, smallest, or interior singular/eigenvalues, and can use preconditioning to accelerate convergence. Homepage: http://www.cs.wm.edu/~andreas/software/ URL: http://www.cs.wm.edu/~andreas/software/<br /><br /><br /></div> | |||
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| align="center" | [http://prinseq.sourceforge.net prinseq] | | align="center" | [http://prinseq.sourceforge.net prinseq] | ||