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</translate> | </translate> | ||
<tabs> | <tabs> | ||
<tab name="Beast ≥ 2.5.x" > | |||
$ module load beast/2.5.1 | |||
$ packagemanager -list | |||
Name | Installation Status | Latest Version | Dependencies | Description | |||
-------------------------------------------------------------------------- | |||
BEAST | 2.5.1 | 2.5.0 | | BEAST core | |||
-------------------------------------------------------------------------- | |||
bacter | NA | 2.2.0 | | Bacterial ARG inference. | |||
BADTRIP | NA | 1.0.0 | | Infer transmission time for [...] | |||
[...] | |||
SNAPP | NA | 1.4.1 | | SNP and AFLP Phylogenies | |||
[...] | |||
$ packagemanager -add SNAPP | |||
Package SNAPP is installed in ~/.beast/2.5/SNAPP. | |||
$ packagemanager -list | |||
Name | Installation Status | Latest Version | Dependencies | Description | |||
-------------------------------------------------------------------------- | |||
BEAST | 2.5.1 | 2.5.0 | | BEAST core | |||
-------------------------------------------------------------------------- | |||
bacter | NA | 2.2.0 | | Bacterial ARG inference. | |||
BADTRIP | NA | 1.0.0 | | Infer transmission time for [...] | |||
[...] | |||
SNAPP | 1.4.1 | 1.4.1 | | SNP and AFLP Phylogenies | |||
[...] | |||
</tab> | |||
<tab name="Beast ≤ 2.4.x"> | <tab name="Beast ≤ 2.4.x"> | ||
$ module load beast/2.4.0 | $ module load beast/2.4.0 | ||
$ addonmanager -list | $ addonmanager -list | ||
Name | Name | Installation Status | Latest Version | Dependencies | Description | ||
--------------------------------------------------------------------------- | |||
BEAST | BEAST | 2.4.0 | 2.4.8 | | BEAST core | ||
--------------------------------------------------------------------------- | |||
bacter | bacter | not installed | 1.2.3 | | Bacterial ARG inference. | ||
BASTA | BASTA | not installed | 2.3.2 | | Bayesian structured coalescent approximation | ||
[...] | [...] | ||
SNAPP | SNAPP | not installed | 1.3.0 | | SNP and AFLP Phylogenies | ||
[...] | [...] | ||
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$ addonmanager -list | $ addonmanager -list | ||
Name | Name | Installation Status | Latest Version | Dependencies | Description | ||
--------------------------------------------------------------------------- | |||
BEAST | BEAST | 2.4.0 | 2.4.8 | | BEAST core | ||
--------------------------------------------------------------------------- | |||
------------------------------------------------------------------ | |||
[...] | [...] | ||
SNAPP | SNAPP | 1.3.0 | 1.3.0 | | SNP and AFLP Phylogenies | ||
[...] | [...] | ||
</tab> | </tab> | ||
</tabs> | </tabs> |