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GATK: Difference between revisions
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→Running GATK via Singularity
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</pre> | </pre> | ||
or | or to get a particular [https://hub.docker.com/r/broadinstitute/gatk/tags version]: | ||
<pre> | <pre> | ||
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singularity build gatk_VERSION.sif docker://broadinstitute/gatk:VERSION | singularity build gatk_VERSION.sif docker://broadinstitute/gatk:VERSION | ||
</pre> | </pre> | ||
In your [[Running jobs|SBATCH]] script, you should use something like this: | In your [[Running jobs|SBATCH]] script, you should use something like this: | ||