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Biomolecular simulation: Difference between revisions
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fix link for PLUMED
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* [https://openkim.org/ OpenKIM], the Knowledgebase of Interatomic Models | * [https://openkim.org/ OpenKIM], the Knowledgebase of Interatomic Models | ||
* [https://simtk.org/home/openmm OpenMM] | * [https://simtk.org/home/openmm OpenMM] | ||
* [ | * [https://www.plumed.org PLUMED], a library for code development related to the calculation of free energy in molecular dynamics simulations. See also [[GROMACS]]. | ||
* [https://www.rosettacommons.org Rosetta] | * [https://www.rosettacommons.org Rosetta] | ||
* [https://swift.cmbi.umcn.nl/gv/dssp/ DSSP] | * [https://swift.cmbi.umcn.nl/gv/dssp/ DSSP] | ||