GATK: Difference between revisions

GATK (view source)

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 ==Availability and loading module == <!--T:2-->
-In all Compute Canada clusters (Graham, Cedar, Beluga), we provide
+In all of our clusters (Graham, Cedar, Beluga), we provide
 different versions of GATK. To access the version information you can use
 the [https://docs.computecanada.ca/wiki/Utiliser_des_modules/en module command]:
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 <!--T:16-->
-However, GenomeAnalysisTK.jar must be in PATH. In Compute Canada systems, the environmental variables <code>$EBROOTPICARD</code> for Picard (included in GATK >= 4) and <code>$EBROOTGATK</code> for GATK contain the path to the jar file, so the appropriate way to call GATK <= 3 is:
+However, GenomeAnalysisTK.jar must be in PATH. On our systems, the environmental variables <code>$EBROOTPICARD</code> for Picard (included in GATK >= 4) and <code>$EBROOTGATK</code> for GATK contain the path to the jar file, so the appropriate way to call GATK <= 3 is:
 <!--T:17-->