NAMD: Difference between revisions

Jump to navigation Jump to search
switch from obsolete --gres to --gpus-per-node
(switch from obsolete --gres to --gpus-per-node)
Line 156: Line 156:
#SBATCH -o slurm.%N.%j.out    # STDOUT
#SBATCH -o slurm.%N.%j.out    # STDOUT
#SBATCH -t 0:05:00            # time (D-HH:MM)
#SBATCH -t 0:05:00            # time (D-HH:MM)
#SBATCH --gres=gpu:p100:1
#SBATCH --gpus-per-node=p100:1
#SBATCH --account=def-specifyaccount
#SBATCH --account=def-specifyaccount


Line 173: Line 173:


<!--T:45-->
<!--T:45-->
To use this script on other clusters, please look up the specifications of their available nodes and adjust --cpus-per-task and --gres=gpu: options accordingly.
To use this script on other clusters, please look up the specifications of their available nodes and adjust --cpus-per-task and --gpus-per-node=: options accordingly.


<!--T:46-->
<!--T:46-->
Line 185: Line 185:
#SBATCH --nodes 2  
#SBATCH --nodes 2  
#SBATCH --cpus-per-task=10 # number of threads per task (process)
#SBATCH --cpus-per-task=10 # number of threads per task (process)
#SBATCH --gres=gpu:v100:4
#SBATCH --gpus-per-node=v100:4
#SBATCH --mem=0            # memory per node, 0 means all memory
#SBATCH --mem=0            # memory per node, 0 means all memory
#SBATCH -o slurm.%N.%j.out    # STDOUT
#SBATCH -o slurm.%N.%j.out    # STDOUT
Line 211: Line 211:
#SBATCH --nodes=2
#SBATCH --nodes=2
#SBATCH --cpus-per-task=6
#SBATCH --cpus-per-task=6
#SBATCH --gres=gpu:p100:4
#SBATCH --gpus-per-node=p100:4
#SBATCH -t 0:05:00            # time (D-HH:MM)
#SBATCH -t 0:05:00            # time (D-HH:MM)
#SBATCH --mem=0            # memory per node, 0 means all memory
#SBATCH --mem=0            # memory per node, 0 means all memory
Line 242: Line 242:
#SBATCH --ntasks-per-node=32
#SBATCH --ntasks-per-node=32
#SBATCH --mem 0            # memory per node, 0 means all memory
#SBATCH --mem 0            # memory per node, 0 means all memory
#SBATCH --gres=gpu:p100:2
#SBATCH --gpus-per-node=p100:2
#SBATCH -o slurm.%N.%j.out    # STDOUT
#SBATCH -o slurm.%N.%j.out    # STDOUT
#SBATCH -t 0:05:00            # time (D-HH:MM)
#SBATCH -t 0:05:00            # time (D-HH:MM)
cc_staff
239

edits

Navigation menu