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Custom iPython kernel
(New section for custom kernels) |
(Custom iPython kernel) |
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== Create your own Jupyter Application Kernel == | == Create your own Jupyter Application Kernel == | ||
''(Section under construction)'' Please see the older [[JupyterNotebook#Adding_kernels|configuration procedure here]]. | ''(Section under construction)'' Please see the older [[JupyterNotebook#Adding_kernels|configuration procedure here]]. | ||
=== Julia Kernel === | |||
=== Python Kernel === | |||
In a terminal with an active session on the remote server, | |||
you may configure a [[Python#Creating_and_using_a_virtual_environment|Python virtual environment]] with all the required [[Available_Python_wheels|Python modules]] | |||
and a Jupyter kernel for JupyterLab. | |||
Here are the initial steps for the simplest Jupyter configuration | |||
in a new Python virtual environment: | |||
<ol> | |||
<li>Create the common <code>kernels</code> folder: {{Command2|mkdir -p ~/.local/share/jupyter/kernels}} | |||
<li>Load a Python module: {{Command2|module load python/3.8}} | |||
<li>Create a new Python virtual environment: {{Command2|virtualenv --no-download $HOME/jupyter_py3.8}} | |||
<li>Activate your newly created Python virtual environment: {{Command2|source $HOME/jupyter_py3.8/bin/activate}} | |||
<li>Install the <code>ipykernel</code> library: {{Command2|prompt=(jupyter_py3.8) [name@server ~]$|pip install --no-index ipykernel}} | |||
<li>Generate the kernel spec file. Substitute <code><unique_name></code> by a name that will uniquely identify your kernel: {{Command2|prompt=(jupyter_py3.8) [name@server ~]$|python -m ipykernel install --user --name <unique_name> --display-name "Python 3.8 Kernel"}} | |||
<li>Deactivate the virtual environment: {{Command2|prompt=(jupyter_py3.8) [name@server ~]$|deactivate}} | |||
</ol> | |||
For more information, see the [http://ipython.readthedocs.io/en/stable/install/kernel_install.html ipykernel documentation]. | |||
=== R Kernel === | |||
== Possible error messages == <!--T:30--> | == Possible error messages == <!--T:30--> | ||