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Modules avx512: Difference between revisions
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| align="center" | bio | | align="center" | bio | ||
| align="center" | 3.0.4 | | align="center" | 3.0.4 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: BayesAss: Bayesian Inference of Recent Migration Using Multilocus Genotypes Homepage: http://www.rannala.org/?page_id=245 Keyword:bio<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: BayesAss: Bayesian Inference of Recent Migration Using Multilocus Genotypes Homepage: http://www.rannala.org/?page_id=245 URL: http://www.rannala.org/?page_id=245 Keyword:bio<br /><br /><br /></div> | ||
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| align="center" | [http://www.rannala.org/inference-of-recent-migration bayesass3-snps] | | align="center" | [http://www.rannala.org/inference-of-recent-migration bayesass3-snps] | ||
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| align="center" | - | | align="center" | - | ||
| align="center" | 1.03 | | align="center" | 1.03 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: bgc implements Bayesian estimation of genomic clines to quantify introgression at many loci. Models are available for linked loci, genotype uncertainty and sequence errors. Models for genotype uncertainty and sequence error can be used to estimate genomic cline parameters from next-generation sequence data. Homepage: https://sites.google.com/site/bgcsoftware/<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: bgc implements Bayesian estimation of genomic clines to quantify introgression at many loci. Models are available for linked loci, genotype uncertainty and sequence errors. Models for genotype uncertainty and sequence error can be used to estimate genomic cline parameters from next-generation sequence data. Homepage: https://sites.google.com/site/bgcsoftware/ URL: https://sites.google.com/site/bgcsoftware/<br /><br /><br /></div> | ||
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| align="center" | [https://bitbucket.org/gavinband/bgen/src/default/ bgen] | | align="center" | [https://bitbucket.org/gavinband/bgen/src/default/ bgen] | ||
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| align="center" | - | | align="center" | - | ||
| align="center" | 3.0.4, 3.2.0, 3.3.1 | | align="center" | 3.0.4, 3.2.0, 3.3.1 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation used by a program without recompiling or relinking it. Homepage: https://gitlab.mpi-magdeburg.mpg.de/software/flexiblas-release URL: https://gitlab.mpi-magdeburg.mpg.de/software/flexiblas-release<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: FlexiBLAS is a wrapper library that enables the exchange of the BLAS and LAPACK implementation used by a program without recompiling or relinking it. Homepage: https://gitlab.mpi-magdeburg.mpg.de/software/flexiblas-release URL: https://gitlab.mpi-magdeburg.mpg.de/software/flexiblas-release Extensions: LAPACK-3.11.0<br /><br /><br /></div> | ||
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| align="center" | [http://www.flintlib.org/ flint] | | align="center" | [http://www.flintlib.org/ flint] | ||
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| align="center" | [https://github.com/NVIDIA/gdrcopy gdrcopy] | | align="center" | [https://github.com/NVIDIA/gdrcopy gdrcopy] | ||
| align="center" | - | | align="center" | - | ||
| align="center" | 2.1, 2.3.1 | | align="center" | 2.1, 2.3, 2.3.1 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: A low-latency GPU memory copy library based on NVIDIA GPUDirect RDMA technology. Homepage: https://github.com/NVIDIA/gdrcopy URL: https://github.com/NVIDIA/gdrcopy<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: A low-latency GPU memory copy library based on NVIDIA GPUDirect RDMA technology. Homepage: https://github.com/NVIDIA/gdrcopy URL: https://github.com/NVIDIA/gdrcopy<br /><br /><br /></div> | ||
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| align="center" | tools | | align="center" | tools | ||
| align="center" | 0.3.1 | | align="center" | 0.3.1 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: This is GLOST, the Greedy Launcher Of Small Tasks. Homepage | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: This is GLOST, the Greedy Launcher Of Small Tasks. Homepage: https://github.com/cea-hpc/glost Keyword:tools<br /><br /><br /></div> | ||
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| align="center" | [https://www.gnu.org/software/glpk/ glpk] | | align="center" | [https://www.gnu.org/software/glpk/ glpk] | ||
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| align="center" | vis | | align="center" | vis | ||
| align="center" | 5.99.0 | | align="center" | 5.99.0 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Grace is a WYSIWYG 2D plotting tool for X Windows System and Motif. Homepage: http://freecode.com/projects/grace Keyword:vis<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: Grace is a WYSIWYG 2D plotting tool for X Windows System and Motif. Homepage: http://freecode.com/projects/grace URL: http://freecode.com/projects/grace Keyword:vis<br /><br /><br /></div> | ||
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| align="center" | [http://grackle.readthedocs.io grackle] | | align="center" | [http://grackle.readthedocs.io grackle] | ||
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| align="center" | [https://sourceforge.net/projects/matio/ matio] | | align="center" | [https://sourceforge.net/projects/matio/ matio] | ||
| align="center" | io | | align="center" | io | ||
| align="center" | 1.5.19, 1.5.26 | | align="center" | 1.5.2, 1.5.19, 1.5.26 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: matio is an C library for reading and writing Matlab MAT files. Homepage: https://sourceforge.net/projects/matio/ URL: https://sourceforge.net/projects/matio/ Keyword:io<br /><br /><br /></div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: matio is an C library for reading and writing Matlab MAT files. Homepage: https://sourceforge.net/projects/matio/ URL: https://sourceforge.net/projects/matio/ Keyword:io<br /><br /><br /></div> | ||
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| align="center" | geo | | align="center" | geo | ||
| align="center" | 1.0 | | align="center" | 1.0 | ||
| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: proj4-fortran is a f77 and f90 wrappers for proj4, a cartograohic projections library. Homepage | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: proj4-fortran is a f77 and f90 wrappers for proj4, a cartograohic projections library. Homepage: https://github.com/mhagdorn/proj4-fortran Keyword:geo<br /><br /><br /></div> | ||
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| align="center" | [https://www.vicbioinformatics.com/software.prokka.shtml prokka] | | align="center" | [https://www.vicbioinformatics.com/software.prokka.shtml prokka] | ||