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Parasail: Difference between revisions
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== parasail_aligner Example == <!--T:6--> | == parasail_aligner Example == <!--T:6--> | ||
When using the binary <tt>parasail_aligner</tt> it is important to set the number of threads according to the number of cores allocated in our job. We can set it with | When using the binary <tt>parasail_aligner</tt>, it is important to set the number of threads according to the number of cores allocated in our job. We can set it with | ||
<syntaxhighlight lang="bash"> | <syntaxhighlight lang="bash"> | ||
parasail_aligner -t ${SLURM_CPUS_PER_TASK:-1} ...}} | parasail_aligner -t ${SLURM_CPUS_PER_TASK:-1} ...}} | ||