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MrBayes: Difference between revisions
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==== MPI ==== <!--T:11--> | ==== MPI ==== <!--T:11--> | ||
The following job script will use 8 CPU cores in total, on one or more nodes. | The following job script will use 8 CPU cores in total, on one or more nodes. | ||
Like the previous example it uses an input file (<code>primates.nex</code>) distributed with MrBayes. | Like the previous example, it uses an input file (<code>primates.nex</code>) distributed with MrBayes. | ||
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==== GPU ==== <!--T:17--> | ==== GPU ==== <!--T:17--> | ||
The following job script will use a GPU. | The following job script will use a GPU. | ||
Like the previous examples it uses an input file (<code>primates.nex</code>) distributed with MrBayes. | Like the previous examples, it uses an input file (<code>primates.nex</code>) distributed with MrBayes. | ||
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== Checkpointing == <!--T:23--> | == Checkpointing == <!--T:23--> | ||
If you need very long runs of MrBayes, we suggest you break up the work into several small jobs rather than one very long job. Long jobs have are more likely to be interrupted | If you need very long runs of MrBayes, we suggest you break up the work into several small jobs rather than one very long job. Long jobs have are more likely to be interrupted by hardware failure or maintenance outage. Fortunately, MrBayes has a mechanism for creating checkpoints, in which progress can be saved from one job and continued in a subsequent job. | ||
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