Biomolecular simulation: Difference between revisions

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→‎Software Packages: added links for MM/MD-related modules recently installed
(→‎Software Packages: added external links for LAMMPS, DL_POLY since no internal links available)
(→‎Software Packages: added links for MM/MD-related modules recently installed)
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* [http://www.scd.stfc.ac.uk/SCD/44516.aspx DL_POLY]
* [http://www.scd.stfc.ac.uk/SCD/44516.aspx DL_POLY]
* [http://lammps.sandia.gov/ LAMMPS]
* [http://lammps.sandia.gov/ LAMMPS]
* [[Gaussian]] is available on Graham only
* [https://simtk.org/home/openmm OpenMM]
* [http://www.plumed-code.org PLUMED], a library for code development related to the calculation of free energy in molecular dynamics simulations. See also [[GROMACS]].
* [https://www.rosettacommons.org Rosetta]
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