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= General = <!--T:1--> | = General = <!--T:1--> | ||
'''NAMD''' is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems. | '''NAMD''' is a parallel, object-oriented molecular dynamics code designed for high-performance simulation of large biomolecular systems. | ||
Simulation preparation and analysis is integrated into the | Simulation preparation and analysis is integrated into the [[VMD]] visualization package. | ||
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* Downloads: http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=NAMD | * Downloads: http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=NAMD | ||
* Tutorials: http://www.ks.uiuc.edu/Training/Tutorials/ | * Tutorials: http://www.ks.uiuc.edu/Training/Tutorials/ | ||
Registration is required to download the software. | |||
= Quickstart | = Quickstart guide = <!--T:3--> | ||
This section summarizes configuration details. | This section summarizes configuration details. | ||
=== Environment | === Environment modules === <!--T:4--> | ||
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The following modules providing NAMD are available on | The following modules providing NAMD are available on Graham and Cedar. | ||
<!--T:6--> | <!--T:6--> | ||