QIIME/fr: Difference between revisions

QIIME/fr (view source)

15 bytes added , 4 years ago

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@@ Line 34: / Line 34: @@
 #SBATCH --account=def-someuser
-<div class="mw-translate-fuzzy">
+singularity exec -B $PWD:/home -B /scratch/someuser:/outputs \
-singularity exec -B /home -B /project -B /scratch qiime2-2019.10.sif \
+  -B /projects/someuser/path/to/inputs:/inputs qiime2-2019.10.sif \
-   qiime tools import \
+   qiime tools import --type 'FeatureData[Sequence]' \
-  --type 'FeatureData[Sequence]' \
+   --input-path /inputs/some_fastafile.fa \
-   --input-path /path/to/some_fastafile.fa \
+   --output-path /outputs/some_output_feature.qza
-   --output-path /path/to/some_output_feature.qza
-</div>
 <div class="mw-translate-fuzzy">