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[[Category:Software]] | [[Category:Software]] | ||
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Anaconda is a Python distribution. We ask our users to '''not install Anaconda on our clusters'''. | Anaconda is a Python distribution. We ask our users to '''not install Anaconda on our clusters'''. | ||
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==Do not install Anaconda on our clusters== | ==Do not install Anaconda on our clusters== | ||
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Your software should run - if it doesn't, don't hesitate to [[Technical support|contact us]]. | Your software should run - if it doesn't, don't hesitate to [[Technical support|contact us]]. | ||
==Usage de Singularity== | |||
Dans certaines situations, la complexité des dépendances d'un logiciel exige une solution où l'on peut maîtriser entièrement l'environnement. Pour ces situations, on recommande l'outil [[Singularity/fr | Singularity]] : notez qu'une image Docker peut être convertie en image Singularity. Le seul inconvénient de Singularity, c'est que les images consomment beaucoup d'espace disque, alors si votre groupe de recherche prévoit d'utiliser plusieurs images, il serait sage de les regrouper ensemble dans un seul répertoire de l'espace projet du groupe pour éviter les doublons. | |||
== Examples where Anaconda does not work == | == Examples where Anaconda does not work == | ||
;R: A conda recipe forces the installation of R. This installation does not perform nearly as well as the version we provide as a module (which uses Intel MKL). This same R does not work well, and jobs launched with it may die and waste both computing ressources as well as your time. | ;R: A conda recipe forces the installation of R. This installation does not perform nearly as well as the version we provide as a module (which uses Intel MKL). This same R does not work well, and jobs launched with it may die and waste both computing ressources as well as your time. |