Talk:Nextflow

Is it possible to get a configuration for Graham? I tried to write one that would use the majority of nodes, but I guess it would have to be modified if you wanted to use one of the specialized nodes. I'm also not an expert with this.

 graham{
   max_memory='125G'
   max_cpu=32
   max_time='168h'
 }

I was unable to access data using singularity until I modified my ~/.nextflow/config file to include the mount options from the Singularity page here:

It turned out as:

singularity {

 runOptions = '-B /home -B /project -B /scratch -B /localscratch'

}