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AMBER: Difference between revisions
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* The [https://ambermd.org/AmberTools.php AmberTools] (module <code>ambertools</code>) contain a number of tools for preparing and | * The [https://ambermd.org/AmberTools.php AmberTools] (module <code>ambertools</code>) contain a number of tools for preparing and analyzing simulations, as well as <code>sander</code> to perform molecular dynamics simulations, all of which are free and open source. | ||
* [https://ambermd.org/AmberMD.php Amber] (module <code>amber</code>) contains everything that is included in <code>ambertools</code>, but adds the advanced <code>pmemd</code> program for molecular dynamics simulations. | * [https://ambermd.org/AmberMD.php Amber] (module <code>amber</code>) contains everything that is included in <code>ambertools</code>, but adds the advanced <code>pmemd</code> program for molecular dynamics simulations. | ||