BUSCO/fr: Difference between revisions

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{{Command|avail_wheel busco}}
{{Command|avail_wheel busco}}


<div class="mw-translate-fuzzy">
== Wheel Python ==
== Wheel Python ==
=== Installation ===
=== Installation ===
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{{Commands
{{Commands
|module load StdEnv/2020 gcc python/3.10 augustus hmmer blast+ metaeuk prodigal r bbmap}}
|module load StdEnv/2020 gcc python/3.10 augustus hmmer blast+ metaeuk prodigal r bbmap}}
</div>


<b>2.</b> Créez l'environnement virtuel.
<b>2.</b> Créez l'environnement virtuel.
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}}
}}


<div class="mw-translate-fuzzy">
<b>3.</b> Installez le wheel et ses dépendances.
<b>3.</b> Installez le wheel et ses dépendances.
{{Command
{{Command
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|pip install biopython pandas busco --no-index
|pip install biopython pandas busco --no-index
}}
}}
</div>


<b>4.</b> Validez l'installation.
<b>4.</b> Validez l'installation.
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# Load modules dependencies.
# Load modules dependencies.
module load StdEnv/2020 gcc python augustus hmmer blast+ metaeuk prodigal r bbmap
module load StdEnv/2020 gcc/9.3.0 python/3.10 augustus/3.5.0 hmmer/3.3.2 blast+/2.13.0 metaeuk/6 prodigal/2.6.3 r/4.3.1 bbmap/38.86


# Generate your virtual environment in $SLURM_TMPDIR.
# Generate your virtual environment in $SLURM_TMPDIR.
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