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Parasail/fr: Difference between revisions
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Created page with "# Install any other requirements, such as Biopython virtualenv --no-download $SLURM_TMPDIR/env source $SLURM_TMPDIR/env/bin/activate pip install --no-index --upgrade pip pip install --no-index biopython==1.83"
(Created page with "# biopython bio_score = PairwiseAligner().align(A, A)[0].score") |
(Created page with "# Install any other requirements, such as Biopython virtualenv --no-download $SLURM_TMPDIR/env source $SLURM_TMPDIR/env/bin/activate pip install --no-index --upgrade pip pip install --no-index biopython==1.83") |
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module load parasail/2.6.2 python/3.11 scipy-stack/2023b | module load parasail/2.6.2 python/3.11 scipy-stack/2023b | ||
# Install any other requirements, such as Biopython | # Install any other requirements, such as Biopython | ||
virtualenv --no-download $SLURM_TMPDIR/env | virtualenv --no-download $SLURM_TMPDIR/env | ||
| Line 96: | Line 95: | ||
pip install --no-index --upgrade pip | pip install --no-index --upgrade pip | ||
pip install --no-index biopython==1.83 | pip install --no-index biopython==1.83 | ||
<div lang="en" dir="ltr" class="mw-content-ltr"> | <div lang="en" dir="ltr" class="mw-content-ltr"> | ||