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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. Homepage: https://developer.nvidia.com/cuda-toolkit URL: https://developer.nvidia.com/cuda-toolkit Keyword:tools<br />'''Prerequisites:''' gcc/7.3.0 or intel/2018.3 or pgi/19.4<br />'''Description:''' </div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. Homepage: https://developer.nvidia.com/cuda-toolkit URL: https://developer.nvidia.com/cuda-toolkit Keyword:tools<br />'''Prerequisites:''' gcc/7.3.0 or intel/2018.3 or pgi/19.4<br />'''Description:''' </div> | ||
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| align="center" | [https://developer.nvidia.com/cuda-toolkit cuda/10.1] | |||
| align="center" | tools | |||
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: CUDA (formerly Compute Unified Device Architecture) is a parallel computing platform and programming model created by NVIDIA and implemented by the graphics processing units (GPUs) that they produce. CUDA gives developers access to the virtual instruction set and memory of the parallel computational elements in CUDA GPUs. Homepage: https://developer.nvidia.com/cuda-toolkit URL: https://developer.nvidia.com/cuda-toolkit Keyword:tools<br />'''Prerequisites:''' gcc/7.3.0 or gcc/8.3.0 or intel/2018.3 or intel/2019.3 or pgi/19.4<br />'''Description:''' </div> | |||
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| align="center" | [https://developer.nvidia.com/cuda-toolkit cuda/7.5.18] | | align="center" | [https://developer.nvidia.com/cuda-toolkit cuda/7.5.18] | ||
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Homepage: http://www.broadinstitute.org/gatk/ Keyword:bio<br />'''Prerequisites:''' -<br />'''Description:''' </div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The Genome Analysis Toolkit or GATK is a software package developed at the Broad Institute to analyse next-generation resequencing data. The toolkit offers a wide variety of tools, with a primary focus on variant discovery and genotyping as well as strong emphasis on data quality assurance. Its robust architecture, powerful processing engine and high-performance computing features make it capable of taking on projects of any size. Homepage: http://www.broadinstitute.org/gatk/ Keyword:bio<br />'''Prerequisites:''' -<br />'''Description:''' </div> | ||
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| align="center" | [http://gcc.gnu.org/ gcc-offload/9.1.0] | |||
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: The GNU Compiler with OpenMP/OpenACC offload support for Nvidia PTX Homepage: http://gcc.gnu.org/ URL: http://gcc.gnu.org/<br />'''Prerequisites:''' cudacore/.10.1.243<br />'''Description:''' </div> | |||
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| align="center" | [http://gcc.gnu.org/ gcc/4.8.5] | | align="center" | [http://gcc.gnu.org/ gcc/4.8.5] | ||
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenKIM is an online suite of open source tools for molecular simulation of materials. These tools help to make molecular simulation more accessible and more reliable. Within OpenKIM, you will find an online resource for standardized testing and long-term warehousing of interatomic models and data, and an application programming interface (API) standard for coupling atomistic simulation codes and interatomic potential subroutines. Homepage: https://openkim.org/ Keyword:chem<br />'''Prerequisites:''' intel/2016.4<br />'''Description:''' </div> | | <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: OpenKIM is an online suite of open source tools for molecular simulation of materials. These tools help to make molecular simulation more accessible and more reliable. Within OpenKIM, you will find an online resource for standardized testing and long-term warehousing of interatomic models and data, and an application programming interface (API) standard for coupling atomistic simulation codes and interatomic potential subroutines. Homepage: https://openkim.org/ Keyword:chem<br />'''Prerequisites:''' intel/2016.4<br />'''Description:''' </div> | ||
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| align="center" | [https://www.knime.com/ knime/4.1.0] | |||
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| <div class="mw-collapsible mw-collapsed" style="white-space: pre-line;"><br />Description: KNIME Analytics Platform is the open source software for creating data science applications and services. KNIME stands for KoNstanz Information MinEr. Homepage: https://www.knime.com/ URL: https://www.knime.com/<br />'''Prerequisites:''' -<br />'''Description:''' </div> | |||
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| align="center" | [http://ccb.jhu.edu/software/kraken/ kraken/0.10.5-beta] | | align="center" | [http://ccb.jhu.edu/software/kraken/ kraken/0.10.5-beta] | ||