QIIME/fr: Difference between revisions

QIIME/fr (view source)

19 bytes added , 4 years ago

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@@ Line 40: / Line 40: @@
    --output-path /outputs/some_output_feature.qza
-<div class="mw-translate-fuzzy">
+singularity exec -B $PWD:/home -B /scratch/someuser:/outputs \
-singularity exec -B /home -B /project -B /scratch qiime2-2019.10.sif \
+  -B /projects/someuser/path/to/inputs:/inputs qiime2-2019.10.sif \
    qiime tools import \
    --type 'FeatureData[Taxonomy]' \
    --input-format HeaderlessTSVTaxonomyFormat \
-   --input-path /path/to/some_taxonomy_file.tax \
+   --input-path /inputs/some_taxonomy_file.tax \
-   --output-path /path/to/some_output_ref-taxonomy.qza
+   --output-path /outputs/some_output_ref-taxonomy.qza
-</div>
 <div class="mw-translate-fuzzy">